Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML045W
Length:
440
Number of sequences:
5887
Description:
YML045W-A YML045W-A SGDID:S000007381, Chr XIII from 184461-185783, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P0C2I8    440   YL14A_YEAST Transposon Ty1-LR4 Gag polyprotei...4350     880     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
62P0C2I4    478   YH11A_YEAST Transposon Ty1-H Gag polyprotein ...4730     879     92     92GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
63P08405    440   TY1A_YEASX Transposon TyH3 Gag polyprotein OS...4350     878     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
64P0CX76    440   YM12A_YEAST Transposon Ty1-ML2 Gag polyprotei...4350     877     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
65P0CX75    440   YL13A_YEAST Transposon Ty1-LR3 Gag polyprotei...4350     877     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
66P0CX74    440   YJ11A_YEAST Transposon Ty1-JR1 Gag polyprotei...4350     877     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
67P0CX73    440   YP11A_YEAST Transposon Ty1-PL Gag polyprotein...4350     876     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
68P0CX72    440   YL12A_YEAST Transposon Ty1-LR2 Gag polyprotei...4350     876     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
69P0CX71    440   YE11A_YEAST Transposon Ty1-ER1 Gag polyprotei...4350     876     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70P0CX70    440   YD15A_YEAST Transposon Ty1-DR6 Gag polyprotei...4350     876     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
71P47099    440   YJ12A_YEAST Transposon Ty1-JR2 Gag polyprotei...4350     868     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
72P0CX58    440   YP12A_YEAST Transposon Ty1-PR1 Gag polyprotei...4350     866     97     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
73P0CX57    440   YA11A_YEAST Transposon Ty1-A Gag polyprotein ...4350     866     97     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
74Q12085    440   YG11A_YEAST Transposon Ty1-GR1 Gag polyprotei...4350     863     97     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
75Q12470    440   YN12A_YEAST Transposon Ty1-NL2 Gag polyprotei...4350     863     97     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
76Q12391    440   YN11A_YEAST Transposon Ty1-NL1 Gag polyprotei...4350     761     86     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
77Q03964    440   YD17A_YEAST Transposon Ty1-DR2 Gag polyprotei...4350     683     78     85GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78Q04215    440   YM13A_YEAST Transposon Ty1-MR1 Gag polyprotei...4350     681     77     84GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
79Q12266    440   YB11A_YEAST Transposon Ty1-BL Gag polyprotein...4350     676     77     84GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
80P25383    438   YC21A_YEAST Transposon Ty2-C Gag polyprotein ...4358e-128     413     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
81Q99303    438   YD23A_YEAST Transposon Ty2-DR3 Gag polyprotei...4358e-128     413     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
82P0C2J6    438   YL22A_YEAST Transposon Ty2-LR2 Gag polyprotei...4353e-127     411     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
83Q12260    438   YB21A_YEAST Transposon Ty2-B Gag polyprotein ...4354e-127     411     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
84Q12439    438   YO21A_YEAST Transposon Ty2-OR1 Gag polyprotei...4356e-127     410     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
85Q03483    438   YD22A_YEAST Transposon Ty2-DR2 Gag polyprotei...4356e-127     410     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
86Q12392    438   YD21A_YEAST Transposon Ty2-DR1 Gag polyprotei...4366e-127     410     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
87Q12293    438   YO22A_YEAST Transposon Ty2-OR2 Gag polyprotei...4353e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
88P0C2J4    438   YL21A_YEAST Transposon Ty2-LR1 Gag polyprotei...4353e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
89P0CX62    438   YG22A_YEAST Transposon Ty2-GR2 Gag polyprotei...4354e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
90P0CX61    438   YF21A_YEAST Transposon Ty2-F Gag polyprotein ...4354e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
91P0C2J2    438   YG21A_YEAST Transposon Ty2-GR1 Gag polyprotei...4354e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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