UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YML029W

Length:

838

Number of sequences:

5887

Description:

YML029W USA1 SGDID:S000004491, Chr XIII from 217362-219878, Genome Release 64-1-1, Verified ORF, "Scaffold subunit of the Hrd1p ubiquitin ligase that also promotes ligase oligomerization; involved in ER-associated protein degradation (ERAD); interacts with the U1 snRNP-specific protein, Snp1p"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	Q03714	838	USA1_YEAST U1 SNP1-associating protein 1 OS=S...	838	0	1726	100	100	GO:0000839; C:Hrd1p ubiquitin ligase ERAD-L complex; IMP:SGD.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
									GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0032947; F:protein complex scaffold; IDA:SGD.
									GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.::GO:0032461; P:positive regulation of protein oligomerization; IMP:SGD.
2	Q3AQK7	1022	IF2_CHLCH Translation initiation factor IF-2 ...	90	0.094	40	27	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
3	B3QQI2	939	IF2_CHLP8 Translation initiation factor IF-2 ...	90	0.49	37.7	27	47	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
4	A4SGG2	900	IF2_PROVI Translation initiation factor IF-2 ...	82	2.9	35	28	51	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.

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