Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML010W
Length:
1063
Number of sequences:
5887
Description:
YML010W SPT5 SGDID:S000004470, Chr XIII from 247677-250868, Genome Release 64-1-1, Verified ORF, "Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a complex with Spt4p; contains a C-terminal repeat domain that is a target for phosphorylation by Sgv1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P0C6X4    7132   R1AB_CVHN5 Replicase polyprotein 1ab OS=Human...1550.12     40.4     28     42GO:0044172; C:host cell endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IEA:InterPro.::GO:0019034; C:viral replication complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0016896; F:exoribonuclease activity, producing 5'-phosphomonoesters; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008168; F:methyltransferase activity; IEA:InterPro.::GO:0008242; F:omega peptidase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.::GO:0019082; P:viral protein processing; IEA:InterPro.
32Q9Y6Z5    254   MLAS1_HUMAN Putative uncharacterized protein ...1470.38     37.7     28     34
33P51780    259   PRIO_TRIVU Major prion protein OS=Trichosurus...590.53     37.4     36     44GO:0031225; C:anchored to membrane; IEA:UniProtKB-KW.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005507; F:copper ion binding; ISS:UniProtKB.
GO:0051260; P:protein homooligomerization; IEA:InterPro.
34P91353    278   RM24_CAEEL Probable 39S ribosomal protein L24...410.85     36.6     37     68GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0006412; P:translation; IEA:InterPro.
35Q9H2Y7    1883   ZF106_HUMAN Zinc finger protein 106 homolog O...1161.4     37     29     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
36Q4PI89    1723   SPT6_USTMA Transcription elongation factor SP...1122.3     36.2     28     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
37P54789    707   ORC1_SCHPO Origin recognition complex subunit...642.4     35.8     33     58GO:0031261; C:DNA replication preinitiation complex; IC:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.::GO:0005664; C:nuclear origin of replication recognition complex; IDA:UniProtKB.::GO:0043596; C:nuclear replication fork; IC:PomBase.::GO:0005656; C:pre-replicative complex; IC:PomBase.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0003688; F:DNA replication origin binding; IDA:UniProtKB.
GO:0006270; P:DNA-dependent DNA replication initiation; IMP:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IMP:PomBase.::GO:0007090; P:regulation of S phase of mitotic cell cycle; IMP:PomBase.
38Q869L3    5900   MDN1_DICDI Midasin OS=Dictyostelium discoideu...2349.5     34.3     20     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0008134; F:transcription factor binding; IEA:InterPro.
GO:0006461; P:protein complex assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
39P51592    2885   HYD_DROME E3 ubiquitin-protein ligase hyd OS=...614     35.4     31     51GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:FlyBase.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IBA:RefGenome.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0048749; P:compound eye development; NAS:FlyBase.::GO:0007455; P:eye-antennal disc morphogenesis; IMP:FlyBase.::GO:0008585; P:female gonad development; IMP:FlyBase.::GO:0007446; P:imaginal disc growth; IMP:FlyBase.::GO:0007112; P:male meiosis cytokinesis; IMP:FlyBase.::GO:0045879; P:negative regulation of smoothened signaling pathway; NAS:FlyBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IBA:RefGenome.::GO:0030162; P:regulation of proteolysis; NAS:FlyBase.::GO:0007289; P:spermatid nucleus differentiation; IMP:FlyBase.
40Q8IID4    5251   DYHC2_PLAF7 Dynein heavy chain-like protein P...1547.4     34.7     21     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003777; F:microtubule motor activity; ISS:UniProtKB.
GO:0007018; P:microtubule-based movement; ISS:UniProtKB.
41Q9JLM4    1370   ZMYM3_MOUSE Zinc finger MYM-type protein 3 OS...1344.6     35     27     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; ISS:UniProtKB.
42P90666    837   TXND3_ANTCR Thioredoxin domain-containing pro...726     34.7     35     49
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004550; F:nucleoside diphosphate kinase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0045454; P:cell redox homeostasis; IEA:InterPro.::GO:0006241; P:CTP biosynthetic process; IEA:InterPro.::GO:0006183; P:GTP biosynthetic process; IEA:InterPro.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.::GO:0006228; P:UTP biosynthetic process; IEA:InterPro.
43P08234    262   VG38_BPM1 Receptor-recognizing protein OS=Ent...538.1     33.5     34     45
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
44F4IAE9    1210   Y1591_ARATH ATPase family AAA domain-containi...578.1     34.3     37     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
45Q84K34    349   SIL10_ARATH E3 ubiquitin-protein ligase SINA-...959.7     33.5     27     44GO:0005634; C:nucleus; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:InterPro.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
records
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