Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR466W
Length:
1382
Number of sequences:
5887
Description:
YLR466W YRF1-4 SGDID:S000004458, Chr XII from 1067087-1071235, Genome Release 64-1-1, Verified ORF, "Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q4R8K5    406   IF4A1_MACFA Eukaryotic initiation factor 4A-I...1320.002     46.2     33     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
92P41376    412   IF4A1_ARATH Eukaryotic initiation factor 4A-1...1320.002     46.2     30     53GO:0005618; C:cell wall; IDA:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0046686; P:response to cadmium ion; IEP:TAIR.
93Q9SQV1    1088   RH40_ARATH DEAD-box ATP-dependent RNA helicas...1330.002     46.6     29     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005773; C:vacuole; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
94P46942    607   DB10_NICSY ATP-dependent RNA helicase-like pr...1530.002     46.2     28     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
95Q2GWJ5    394   FAL1_CHAGB ATP-dependent RNA helicase FAL1 OS...1550.002     45.8     28     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
96Q4IAA0    401   FAL1_GIBZE ATP-dependent RNA helicase FAL1 OS...1560.002     45.8     28     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
97Q9P735    400   FAL1_NEUCR ATP-dependent RNA helicase fal-1 O...1560.002     45.8     28     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
98Q55D61    405   IF4A_DICDI Eukaryotic initiation factor 4A OS...1580.002     45.8     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
99Q5A9Z6    399   FAL1_CANAL ATP-dependent RNA helicase FAL1 OS...1580.002     45.4     27     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
100Q9GLV6    940   DDX58_PIG Probable ATP-dependent RNA helicase...1220.003     46.2     29     48GO:0015629; C:actin cytoskeleton; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0032587; C:ruffle membrane; ISS:UniProtKB.::GO:0005923; C:tight junction; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; ISS:UniProtKB.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0045087; P:innate immune response; ISS:UniProtKB.::GO:0002230; P:positive regulation of defense response to virus by host; ISS:UniProtKB.::GO:0032727; P:positive regulation of interferon-alpha production; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0030334; P:regulation of cell migration; ISS:UniProtKB.::GO:0039529; P:RIG-I signaling pathway; ISS:UniProtKB.
101A2QFL3    495   DBP3_ASPNC ATP-dependent RNA helicase dbp3 OS...760.003     45.8     32     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
102A3GFV3    399   FAL1_PICST ATP-dependent RNA helicase FAL1 OS...1150.003     45.4     32     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
103A5UDI1    415   RHLB_HAEIE ATP-dependent RNA helicase rhlB OS...1430.003     45.4     27     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
104A3LP87    445   DBP8_PICST ATP-dependent RNA helicase DBP8 OS...1100.003     45.4     27     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
105Q94A52    408   RH2_ARATH DEAD-box ATP-dependent RNA helicase...1500.003     45.4     27     49GO:0035145; C:exon-exon junction complex; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0016607; C:nuclear speck; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:TAIR.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IPI:TAIR.::GO:0001666; P:response to hypoxia; IDA:TAIR.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
106P41381    413   IF4A8_TOBAC Eukaryotic initiation factor 4A-8...1320.003     45.4     29     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
107A4QU31    401   FAL1_MAGO7 ATP-dependent RNA helicase FAL1 OS...1560.003     45.1     28     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
108P44922    415   RHLB_HAEIN ATP-dependent RNA helicase rhlB OS...1430.003     45.1     27     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
109A5DWJ1    399   FAL1_LODEL ATP-dependent RNA helicase FAL1 OS...1570.003     45.1     27     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
110A5UI36    415   RHLB_HAEIG ATP-dependent RNA helicase rhlB OS...1430.003     45.1     27     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
111P41377    412   IF4A2_ARATH Eukaryotic initiation factor 4A-2...1320.004     45.1     29     53GO:0005829; C:cytosol; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0046686; P:response to cadmium ion; IEP:TAIR.
112O95786    925   DDX58_HUMAN Probable ATP-dependent RNA helica...580.004     45.4     41     59GO:0015629; C:actin cytoskeleton; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0032587; C:ruffle membrane; IDA:UniProtKB.::GO:0005923; C:tight junction; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IDA:UniProtKB.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003727; F:single-stranded RNA binding; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IDA:UniProtKB.
GO:0009597; P:detection of virus; IDA:BHF-UCL.::GO:0045087; P:innate immune response; IMP:UniProtKB.::GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome.::GO:0002230; P:positive regulation of defense response to virus by host; IMP:UniProtKB.::GO:0032727; P:positive regulation of interferon-alpha production; IDA:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; IMP:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IC:BHF-UCL.::GO:0042993; P:positive regulation of transcription factor import into nucleus; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0030334; P:regulation of cell migration; IDA:UniProtKB.::GO:0034344; P:regulation of type III interferon production; TAS:UniProtKB.::GO:0039529; P:RIG-I signaling pathway; IMP:UniProtKB.
113Q10055    394   FAL1_SCHPO ATP-dependent RNA helicase fal1 OS...1560.005     44.7     26     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; ISS:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; ISS:PomBase.
114Q6HPE6    528   CSHA_BACHK DEAD-box ATP-dependent RNA helicas...1180.005     44.7     31     53GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
115Q81VG0    528   CSHA_BACAN DEAD-box ATP-dependent RNA helicas...1180.005     44.7     31     53GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
116A0R8U6    528   CSHA_BACAH DEAD-box ATP-dependent RNA helicas...1180.005     44.7     31     53GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
117Q73EU1    525   CSHA_BACC1 DEAD-box ATP-dependent RNA helicas...1180.006     44.7     31     53GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
118Q81IT9    533   CSHA_BACCR DEAD-box ATP-dependent RNA helicas...1180.006     44.7     31     53GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
119A8Z414    10421   EBH_STAAT Extracellular matrix-binding protei...1431.5     37.4     20     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0009405; P:pathogenesis; IEA:InterPro.
120Q2FH04    10421   EBH_STAA3 Extracellular matrix-binding protei...1431.5     37.4     20     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0009405; P:pathogenesis; IEA:InterPro.
121Q5HFY8    10498   EBH_STAAC Extracellular matrix-binding protei...1431.5     37.4     20     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0009405; P:pathogenesis; IEA:InterPro.
records
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