Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR424W
Length:
708
Number of sequences:
5887
Description:
YLR424W SPP382 SGDID:S000004416, Chr XII from 973395-975521, Genome Release 64-1-1, Verified ORF, "Essential protein that forms a dimer with Ntr2p; also forms a trimer, with Ntr2p and Prp43p, that is involved in spliceosome disassembly; found also in a multisubunit complex with the splicing factor Clf1p; suppressor of prp38-1 mutation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91P87143    565   YDMD_SCHPO Uncharacterized RNA-binding protei...634.6     34.3     33     52GO:0005634; C:nucleus; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; NAS:PomBase.
92P42698    387   DR111_ARATH DNA-damage-repair/toleration prot...954.6     33.9     31     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IGI:TAIR.
93P48234    707   NOL10_YEAST Ribosome biogenesis protein ENP2 ...835.4     33.9     27     54GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0042274; P:ribosomal small subunit biogenesis; IMP:SGD.::GO:0006364; P:rRNA processing; IPI:SGD.
94Q9N4G4    1475   MED1_CAEEL Mediator of RNA polymerase II tran...1195.9     33.9     30     46GO:0016592; C:mediator complex; IEA:InterPro.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
95O94585    187   YQ7D_SCHPO Meiotically up-regulated protein C...416.4     32.7     39     56GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0007126; P:meiosis; IMP:PomBase.
96Q803R5    829   MTR1_DANRE Cap-specific mRNA (nucleoside-2'-O...1256.7     33.9     26     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006370; P:mRNA capping; ISS:UniProtKB.
97Q54WR1    757   MTR1_DICDI Cap-specific mRNA (nucleoside-2'-O...508.3     33.5     38     48
GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006370; P:mRNA capping; ISS:UniProtKB.
98Q9DBC3    837   MTR1_MOUSE Cap-specific mRNA (nucleoside-2'-O...638.5     33.5     33     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006370; P:mRNA capping; ISS:UniProtKB.
99P21407    323   VPRT_SMRVH Protease OS=Squirrel monkey retrov...388.8     33.1     45     55
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0046080; P:dUTP metabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
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