Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR417W
Length:
566
Number of sequences:
5887
Description:
YLR417W VPS36 SGDID:S000004409, Chr XII from 955010-956710, Genome Release 64-1-1, Verified ORF, "Component of the ESCRT-II complex; contains the GLUE (GRAM Like Ubiquitin binding in EAP45) domain which is involved in interactions with ESCRT-I and ubiquitin-dependent sorting of proteins into the endosome"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q06696    566   VPS36_YEAST Vacuolar protein-sorting-associat...5660     1166     100     100GO:0000814; C:ESCRT II complex; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0045053; P:protein retention in Golgi apparatus; IMP:SGD.::GO:0006623; P:protein targeting to vacuole; IPI:SGD.::GO:0043162; P:ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IC:SGD.
2O43038    467   VPS36_SCHPO Vacuolar protein-sorting-associat...5699e-31     128     23     40GO:0000814; C:ESCRT II complex; ISS:PomBase.::GO:0005794; C:Golgi apparatus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006900; P:membrane budding; IC:PomBase.::GO:0045053; P:protein retention in Golgi apparatus; ISS:PomBase.::GO:0043328; P:protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IMP:PomBase.
3Q54T18    611   VPS36_DICDI Vacuolar protein-sorting-associat...2330.0000002     57.4     27     48GO:0000814; C:ESCRT II complex; ISS:dictyBase.
GO:0006605; P:protein targeting; ISS:dictyBase.
4Q9FF81    440   VPS36_ARATH Vacuolar protein sorting-associat...1580.006     43.1     24     47GO:0000814; C:ESCRT II complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
5Q5MIB6    843   PYGB_SHEEP Glycogen phosphorylase, brain form...1360.029     41.2     27     43
GO:0004645; F:phosphorylase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
GO:0005977; P:glycogen metabolic process; IEA:UniProtKB-KW.
6Q6DDF4    388   VPS36_XENLA Vacuolar protein-sorting-associat...2210.033     40.4     21     44GO:0005768; C:endosome; ISS:UniProtKB.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
7Q3B7M9    843   PYGB_BOVIN Glycogen phosphorylase, brain form...1350.44     37.4     27     43
GO:0004645; F:phosphorylase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
GO:0005977; P:glycogen metabolic process; IEA:UniProtKB-KW.
8A5PK00    386   VPS36_BOVIN Vacuolar protein-sorting-associat...1570.52     36.6     22     47GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9P0C0A2    386   VPS36_RAT Vacuolar protein-sorting-associated...1570.55     36.6     22     47GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q91XD6    386   VPS36_MOUSE Vacuolar protein-sorting-associat...1570.84     35.8     22     47GO:0005770; C:late endosome; IDA:MGI.::GO:0005764; C:lysosome; IDA:MGI.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0043130; F:ubiquitin binding; IDA:MGI.
GO:0016197; P:endosome transport; IC:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q7ZVK4    382   VPS36_DANRE Vacuolar protein-sorting-associat...1531     35.8     22     47GO:0005768; C:endosome; ISS:UniProtKB.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
12Q86VN1    386   VPS36_HUMAN Vacuolar protein-sorting-associat...1571.7     35     22     47GO:0005829; C:cytosol; TAS:Reactome.::GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0016197; P:endosome transport; TAS:Reactome.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q9FQ09    680   KU80_ARATH ATP-dependent DNA helicase 2 subun...581.8     35     33     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005958; C:DNA-dependent protein kinase-DNA ligase 4 complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.::GO:0003690; F:double-stranded DNA binding; IDA:TAIR.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0015074; P:DNA integration; TAS:TAIR.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006303; P:double-strand break repair via nonhomologous end joining; TAS:TAIR.::GO:0009408; P:response to heat; IEP:TAIR.::GO:0000723; P:telomere maintenance; TAS:TAIR.
14P0CP30    693   NPL4_CRYNJ Nuclear protein localization prote...225.5     33.5     55     64GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
15P0CP31    693   NPL4_CRYNB Nuclear protein localization prote...225.5     33.5     55     64GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
16Q9FK27    336   FB342_ARATH F-box protein At5g50450 OS=Arabid...1287.1     33.1     25     45
GO:0008270; F:zinc ion binding; IEA:InterPro.
17Q9BYM8    510   HOIL1_HUMAN RanBP-type and C3HC4-type zinc fi...289.5     32.7     46     54GO:0071797; C:LUBAC complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043130; F:ubiquitin binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; IDA:UniProtKB.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; IDA:UniProtKB.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IDA:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0097039; P:protein linear polyubiquitination; IDA:UniProtKB.::GO:0050852; P:T cell receptor signaling pathway; IDA:UniProtKB.
records
Previous ‹‹ ›› Next Total records: 17 1 - 17
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::