Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
991Q5RE95    330   WDR5B_PONAB WD repeat-containing protein 5B O...308.7     33.5     40     60
992Q4V7A0    305   WDR61_RAT WD repeat-containing protein 61 OS=...908.7     33.5     37     50GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
993Q55DA2    333   CIAO1_DICDI Probable cytosolic iron-sulfur pr...848.8     33.5     24     49
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
994Q84JM4    1108   TPR3_ARATH Topless-related protein 3 OS=Arabi...1329.1     33.9     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
995P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...399.2     33.5     41     62GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
996Q640J6    313   WD82A_XENLA WD repeat-containing protein 82-A...1929.2     33.5     20     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
997Q0UXP3    471   YTM1_PHANO Ribosome biogenesis protein YTM1 O...659.2     33.5     35     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
998Q94AI7    1131   TPL_ARATH Protein TOPLESS OS=Arabidopsis thal...619.3     33.9     28     52GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0042803; F:protein homodimerization activity; IPI:TAIR.
GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0010072; P:primary shoot apical meristem specification; IMP:TAIR.::GO:0009733; P:response to auxin stimulus; IPI:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010051; P:xylem and phloem pattern formation; IGI:TAIR.
999P53621    1224   COPA_HUMAN Coatomer subunit alpha OS=Homo sap...1159.7     33.9     23     41GO:0030126; C:COPI vesicle coat; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005615; C:extracellular space; IDA:MGI.::GO:0005792; C:microsome; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005179; F:hormone activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0030157; P:pancreatic juice secretion; IDA:MGI.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:Reactome.
1000Q55563    1693   Y163_SYNY3 Uncharacterized WD repeat-containi...1679.9     33.9     21     40
GO:0005488; F:binding; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 1000 991 - 1000
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::