Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841Q8K4P0    1330   WDR33_MOUSE pre-mRNA 3' end processing protei...1032.8     35.4     26     41GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
842Q6RI45    1802   BRWD3_HUMAN Bromodomain and WD repeat-contain...1462.8     35.4     23     41
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.
843Q7T394    410   LIS1A_DANRE Lissencephaly-1 homolog A OS=Dani...952.9     35     25     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0048854; P:brain morphogenesis; IMP:ZFIN.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
844Q3ULA2    605   FBW1A_MOUSE F-box/WD repeat-containing protei...632.9     35.4     32     52GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; IDA:BHF-UCL.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0045309; F:protein phosphorylated amino acid binding; IDA:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:BHF-UCL.
GO:0060444; P:branching involved in mammary gland duct morphogenesis; IMP:MGI.::GO:0071407; P:cellular response to organic cyclic compound; IDA:MGI.::GO:0033598; P:mammary gland epithelial cell proliferation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0042753; P:positive regulation of circadian rhythm; IMP:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006470; P:protein dephosphorylation; IDA:UniProtKB.::GO:0031648; P:protein destabilization; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:BHF-UCL.::GO:0051726; P:regulation of cell cycle; IMP:MGI.::GO:0043122; P:regulation of I-kappaB kinase/NF-kappaB cascade; IMP:MGI.::GO:0061136; P:regulation of proteasomal protein catabolic process; IDA:MGI.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
845Q21215    325   GBLP_CAEEL Guanine nucleotide-binding protein...692.9     35     35     51GO:0030424; C:axon; IDA:WormBase.::GO:0044297; C:cell body; IDA:WormBase.::GO:0005813; C:centrosome; IDA:WormBase.::GO:0030426; C:growth cone; IDA:WormBase.::GO:0000776; C:kinetochore; IDA:WormBase.::GO:0005635; C:nuclear envelope; IDA:WormBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048675; P:axon extension; IMP:WormBase.::GO:0051304; P:chromosome separation; IMP:WormBase.::GO:0000281; P:cytokinesis after mitosis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0008045; P:motor axon guidance; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040038; P:polar body extrusion after meiotic divisions; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.::GO:0033365; P:protein localization to organelle; IMP:WormBase.::GO:0030334; P:regulation of cell migration; IMP:WormBase.
846P38011    319   GBLP_YEAST Guanine nucleotide-binding protein...402.9     35     40     60GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
GO:0001965; F:G-protein alpha-subunit binding; IPI:SGD.::GO:0005092; F:GDP-dissociation inhibitor activity; IDA:SGD.::GO:0004871; F:signal transducer activity; IMP:SGD.
GO:0007186; P:G-protein coupled receptor signaling pathway; IMP:SGD.::GO:0010255; P:glucose mediated signaling pathway; IMP:SGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:SGD.::GO:0017148; P:negative regulation of translation; IMP:SGD.
847P29829    346   GBB2_DROME Guanine nucleotide-binding protein...622.9     35     31     52GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005834; C:heterotrimeric G-protein complex; IDA:FlyBase.::GO:0016028; C:rhabdomere; IDA:FlyBase.
GO:0003924; F:GTPase activity; IMP:FlyBase.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007202; P:activation of phospholipase C activity; IMP:FlyBase.::GO:0016059; P:deactivation of rhodopsin mediated signaling; IMP:FlyBase.::GO:0016056; P:rhodopsin mediated signaling pathway; IMP:FlyBase.
848Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...1252.9     35.4     19     41GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
849C5MJE8    490   LIS1_CANTT Nuclear distribution protein PAC1 ...382.9     35.4     37     61GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
850Q9W328    313   LST8_DROME Protein LST8 homolog OS=Drosophila...1222.9     35     25     43GO:0005737; C:cytoplasm; ISS:UniProtKB.
851A2QVV2    591   CREC_ASPNC Probable catabolite repression pro...702.9     35.4     26     49
GO:0045013; P:carbon catabolite repression of transcription; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
852A1CGS0    295   SEC13_ASPCL Protein transport protein sec13 O...1062.9     35     28     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
853P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...723     35.4     28     43GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
854Q5I0B9    622   ATG16_XENTR Autophagy-related protein 16 OS=X...3253     35.4     20     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
855Q8MYE8    425   PAAF1_DICDI Probable proteasomal ATPase-assoc...913     35     30     43GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
856A5DJX5    507   LIS1_PICGU Nuclear distribution protein PAC1 ...393     35     41     54GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
857B4QFZ8    335   CIAO1_DROSI Probable cytosolic iron-sulfur pr...1083     35     27     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
858Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...1093     35     28     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
859B3NQR5    335   CIAO1_DROER Probable cytosolic iron-sulfur pr...1083     35     27     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
860Q8N3Y1    598   FBXW8_HUMAN F-box/WD repeat-containing protei...743     35.4     24     54
GO:0005515; F:protein binding; IPI:IntAct.
861P79083    328   EIF3I_SCHPO Eukaryotic translation initiation...733     35     29     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0016282; C:eukaryotic 43S preinitiation complex; IDA:PomBase.::GO:0071540; C:eukaryotic translation initiation factor 3 complex, eIF3e; IDA:PomBase.::GO:0071541; C:eukaryotic translation initiation factor 3 complex, eIF3m; IDA:PomBase.::GO:0034399; C:nuclear periphery; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0065007; P:biological regulation; NAS:PomBase.::GO:0071470; P:cellular response to osmotic stress; IMP:PomBase.::GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
862B4HRQ6    335   CIAO1_DROSE Probable cytosolic iron-sulfur pr...1083.1     35     27     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
863O13282    643   TAF5_SCHPO Transcription initiation factor TF...723.1     35.4     26     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0016573; P:histone acetylation; IC:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IC:PomBase.
864Q0CJD8    654   MDV1_ASPTN Mitochondrial division protein 1 O...1863.1     35.4     23     35GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
865O15736    612   TIPD_DICDI Protein tipD OS=Dictyostelium disc...1513.1     35.4     23     43GO:0034274; C:Atg12-Atg5-Atg16 complex; ISS:dictyBase.
GO:0019776; F:Atg8 ligase activity; ISS:dictyBase.
GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0016236; P:macroautophagy; ISS:dictyBase.
866Q5H7C0    499   CDC20_PIG Cell division cycle protein 20 homo...463.1     35     35     57GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.
867Q29RH4    351   THOC3_BOVIN THO complex subunit 3 OS=Bos taur...1223.1     35     19     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
868A1CXL0    488   YTM1_NEOFI Ribosome biogenesis protein ytm1 O...1823.1     35     25     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
869Q6PFM9    677   WDR48_DANRE WD repeat-containing protein 48 O...1283.2     35     25     44GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
870P83774    317   GBLP_CANAL Guanine nucleotide-binding protein...353.2     34.7     46     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:CGD.
GO:0007155; P:cell adhesion; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.
871Q6TMK6    340   GBB1_CRIGR Guanine nucleotide-binding protein...1403.3     34.7     26     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
records
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