Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781Q2U5Z8    650   MDV1_ASPOR Mitochondrial division protein 1 O...1672     35.8     20     40GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
782Q5M9G8    549   DCA11_RAT DDB1- and CUL4-associated factor 11...1182     35.8     29     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
783Q9UT57    608   CFD1_SCHPO Probable cytosolic Fe-S cluster as...1202     35.8     25     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; ISS:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016226; P:iron-sulfur cluster assembly; ISS:PomBase.
784Q13610    501   PWP1_HUMAN Periodic tryptophan protein 1 homo...1412     35.8     21     44GO:0005634; C:nucleus; TAS:ProtInc.
GO:0006351; P:transcription, DNA-dependent; TAS:ProtInc.
785Q54RP0    648   AGTA_DICDI UDP-galactose:fucoside alpha-3-gal...1072     35.8     22     43GO:0005737; C:cytoplasm; TAS:dictyBase.
GO:0004381; F:fucosylgalactoside 3-alpha-galactosyltransferase activity; IEA:EC.
GO:0006486; P:protein glycosylation; IDA:dictyBase.
786B4JSW8    503   WDR55_DROGR WD repeat-containing protein 55 h...802     35.8     24     51
787O22785    525   PR19B_ARATH Pre-mRNA-processing factor 19 hom...2072.1     35.8     22     41GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
788P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...1402.1     35.4     26     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
789P38262    535   SIF2_YEAST SIR4-interacting protein SIF2 OS=S...952.1     35.8     26     51GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0034967; C:Set3 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0045835; P:negative regulation of meiosis; IPI:SGD.::GO:0032874; P:positive regulation of stress-activated MAPK cascade; IMP:SGD.
790B4M4W4    504   WDR55_DROVI WD repeat-containing protein 55 h...802.1     35.8     24     51
791Q6C414    1184   SEC31_YARLI Protein transport protein SEC31 O...1562.1     35.8     22     47GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
792A8XSW2    691   WDR48_CAEBR WD repeat-containing protein 48 h...1622.1     35.8     27     40
793B2B5V0    487   YTM1_PODAN Ribosome biogenesis protein YTM1 O...622.1     35.8     34     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
794Q6LA54    933   YF48_SCHPO Uncharacterized WD repeat-containi...832.1     35.8     33     53GO:0005789; C:endoplasmic reticulum membrane; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
795B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...1632.1     35.4     20     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
796A3LNI7    524   LIS1_PICST Nuclear distribution protein PAC1 ...372.2     35.8     43     57GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
797A8PTE4    674   MDV1_MALGO Mitochondrial division protein 1 O...302.2     35.8     53     70GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
798Q04660    807   ERB1_YEAST Ribosome biogenesis protein ERB1 O...352.2     35.8     34     54GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IMP:SGD.
799Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...1982.2     35.8     21     39GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
800A6NE52    1622   K1875_HUMAN WD repeat-containing protein KIAA...1562.2     35.8     25     44
801A8PD13    448   YTM1_COPC7 Ribosome biogenesis protein YTM1 O...1242.2     35.4     24     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
802B2VZH2    460   YTM1_PYRTR Ribosome biogenesis protein ytm1 O...1002.3     35.4     28     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
803Q54D08    304   LST8_DICDI Protein LST8 homolog OS=Dictyostel...1722.3     35.4     24     38GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0031932; C:TORC2 complex; IPI:dictyBase.
GO:0007190; P:activation of adenylate cyclase activity; IMP:dictyBase.::GO:0032148; P:activation of protein kinase B activity; IMP:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0030838; P:positive regulation of actin filament polymerization; IMP:dictyBase.::GO:0043520; P:regulation of myosin II filament assembly; IMP:dictyBase.
804A6ZMA9    807   ERB1_YEAS7 Ribosome biogenesis protein ERB1 O...352.3     35.8     34     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
805Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...392.3     35.4     44     67
806Q99J79    432   DDB2_MOUSE DNA damage-binding protein 2 OS=Mu...1832.3     35.4     23     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006290; P:pyrimidine dimer repair; IMP:MGI.
807Q2UPK0    783   ERB1_ASPOR Ribosome biogenesis protein erb1 O...732.3     35.8     25     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
808O22212    554   PRP4_ARATH U4/U6 small nuclear ribonucleoprot...642.4     35.4     31     52GO:0016607; C:nuclear speck; IDA:TAIR.
GO:0001709; P:cell fate determination; IMP:TAIR.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0009560; P:embryo sac egg cell differentiation; IMP:TAIR.::GO:0008380; P:RNA splicing; IEA:InterPro.
809A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...662.4     35.4     32     56
810Q9SYX2    1029   SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 O...1402.4     35.8     24     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009658; P:chloroplast organization; IMP:TAIR.::GO:0010100; P:negative regulation of photomorphogenesis; IMP:TAIR.::GO:0009640; P:photomorphogenesis; IMP:TAIR.::GO:0009585; P:red, far-red light phototransduction; IGI:TAIR.::GO:2000028; P:regulation of photoperiodism, flowering; IMP:TAIR.::GO:0010218; P:response to far red light; IEP:TAIR.::GO:0010114; P:response to red light; IEP:TAIR.::GO:0048575; P:short-day photoperiodism, flowering; IMP:TAIR.
811Q6DJD8    475   COR2B_XENLA Coronin-2B OS=Xenopus laevis (Afr...692.4     35.4     33     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
records
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