Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...1181.6     36.2     29     43
752Q39221    393   STLP2_ARATH SEC12-like protein 2 OS=Arabidops...871.6     35.8     32     48GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030176; C:integral to endoplasmic reticulum membrane; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0006888; P:ER to Golgi vesicle-mediated transport; TAS:TAIR.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
753Q2HJ56    500   PWP1_BOVIN Periodic tryptophan protein 1 homo...1411.6     36.2     21     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
754Q9Y0T2    1247   FBXA_DICDI F-box/WD repeat-containing protein...661.6     36.2     29     48GO:0019005; C:SCF ubiquitin ligase complex; IDA:dictyBase.
GO:0005515; F:protein binding; IPI:dictyBase.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0045595; P:regulation of cell differentiation; IMP:dictyBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IMP:dictyBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:dictyBase.
755P0CS34    830   ERB1_CRYNJ Ribosome biogenesis protein ERB1 O...311.6     36.2     45     61GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
756O43017    380   SWD3_SCHPO Set1 complex component swd3 OS=Sch...321.7     35.8     44     59GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
757P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...1511.7     35.8     23     43GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
758O60907    577   TBL1X_HUMAN F-box-like/WD repeat-containing p...1681.7     36.2     18     38GO:0005876; C:spindle microtubule; IDA:UniProtKB.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IPI:UniProtKB.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0019904; F:protein domain specific binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0060070; P:canonical Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0007605; P:sensory perception of sound; IMP:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
759Q10281    314   GBLP_SCHPO Guanine nucleotide-binding protein...411.7     35.8     44     61GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005080; F:protein kinase C binding; IPI:PomBase.::GO:0043022; F:ribosome binding; IDA:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0035556; P:intracellular signal transduction; IMP:PomBase.::GO:2000766; P:negative regulation of cytoplasmic translation; ISS:PomBase.::GO:0031139; P:positive regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0032956; P:regulation of actin cytoskeleton organization; IGI:PomBase.::GO:0032995; P:regulation of fungal-type cell wall biogenesis; IGI:PomBase.
760Q6P6T4    649   EMAL2_RAT Echinoderm microtubule-associated p...1221.7     36.2     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0008022; F:protein C-terminus binding; IDA:RGD.::GO:0005102; F:receptor binding; IDA:RGD.
761P0CS35    830   ERB1_CRYNB Ribosome biogenesis protein ERB1 O...311.7     36.2     45     61GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
762Q8WQ85    1704   VILD_DICDI Villidin OS=Dictyostelium discoide...821.7     36.2     28     48GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0045335; C:phagocytic vesicle; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.::GO:0005543; F:phospholipid binding; IEA:InterPro.
GO:0007010; P:cytoskeleton organization; IEA:InterPro.::GO:0030835; P:negative regulation of actin filament depolymerization; IBA:RefGenome.::GO:0051707; P:response to other organism; TAS:dictyBase.
763Q61Y48    416   LIN53_CAEBR Probable histone-binding protein ...1511.7     35.8     23     47GO:0017053; C:transcriptional repressor complex; ISS:UniProtKB.
GO:0042826; F:histone deacetylase binding; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; ISS:UniProtKB.::GO:0040035; P:hermaphrodite genitalia development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
764A1CH75    488   YTM1_ASPCL Ribosome biogenesis protein ytm1 O...1821.7     36.2     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
765A8WGE3    480   COR2B_XENTR Coronin-2B OS=Xenopus tropicalis ...691.7     35.8     35     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
766Q5R7R2    325   EIF3I_PONAB Eukaryotic translation initiation...721.7     35.8     26     46GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
767O74879    634   NOL10_SCHPO Ribosome biogenesis protein enp2 ...741.7     36.2     27     51GO:0030686; C:90S preribosome; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; ISS:PomBase.
GO:0042274; P:ribosomal small subunit biogenesis; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.
768Q05B17    678   WDR48_XENTR WD repeat-containing protein 48 O...1281.8     36.2     25     45GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
769Q8N136    415   WDR69_HUMAN Outer row dynein assembly protein...2281.8     35.8     18     40GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
770Q5BK30    415   WDR69_RAT Outer row dynein assembly protein 1...2361.8     35.8     21     41GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
771B8NGT5    706   SCONB_ASPFN Probable E3 ubiquitin ligase comp...1611.8     36.2     24     40
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
772Q2UFN8    705   SCONB_ASPOR Probable E3 ubiquitin ligase comp...1611.8     36.2     24     40
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
773Q12834    499   CDC20_HUMAN Cell division cycle protein 20 ho...461.8     35.8     35     59GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.
GO:0051488; P:activation of anaphase-promoting complex activity; IDA:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
774Q965S8    327   EIF3I_CAEEL Eukaryotic translation initiation...1001.8     35.8     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
775Q759L2    346   EIF3I_ASHGO Eukaryotic translation initiation...941.8     35.8     26     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
776Q8SQS4    556   TAF5_ENCCU Transcription initiation factor TF...771.9     35.8     23     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
777B4P7Q3    335   CIAO1_DROYA Probable cytosolic iron-sulfur pr...1081.9     35.4     27     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
778Q5R7H5    546   DCA11_PONAB DDB1- and CUL4-associated factor ...1181.9     35.8     29     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
779O95170    752   CDRT1_HUMAN CMT1A duplicated region transcrip...1291.9     36.2     25     45
780O18640    318   GBLP_DROME Guanine nucleotide-binding protein...392     35.4     41     64GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0042335; P:cuticle development; IMP:FlyBase.::GO:0007626; P:locomotory behavior; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0018991; P:oviposition; IMP:FlyBase.::GO:0035220; P:wing disc development; IMP:FlyBase.
781Q2U5Z8    650   MDV1_ASPOR Mitochondrial division protein 1 O...1672     35.8     20     40GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
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