Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721A8X8C6    368   TG125_CAEBR WD repeat-containing protein tag-...501.4     36.2     28     58
722Q9UNX4    943   WDR3_HUMAN WD repeat-containing protein 3 OS=...1061.4     36.6     29     43GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
723P54311    340   GBB1_RAT Guanine nucleotide-binding protein G...1401.4     36.2     27     40GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0010659; P:cardiac muscle cell apoptotic process; IDA:MGI.::GO:0071456; P:cellular response to hypoxia; IDA:MGI.::GO:0007204; P:elevation of cytosolic calcium ion concentration; IMP:RGD.
724P62874    340   GBB1_MOUSE Guanine nucleotide-binding protein...1401.4     36.2     27     40GO:0005834; C:heterotrimeric G-protein complex; IPI:MGI.::GO:0001750; C:photoreceptor outer segment; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007200; P:activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger; IDA:MGI.::GO:0008283; P:cell proliferation; IDA:MGI.::GO:0060041; P:retina development in camera-type eye; IMP:MGI.::GO:0050909; P:sensory perception of taste; IDA:MGI.
725P62873    340   GBB1_HUMAN Guanine nucleotide-binding protein...1401.4     36.2     27     40GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0005624; C:membrane fraction; ISS:BHF-UCL.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; ISS:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; ISS:BHF-UCL.::GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0071380; P:cellular response to prostaglandin E stimulus; ISS:BHF-UCL.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; TAS:ProtInc.::GO:0030168; P:platelet activation; TAS:Reactome.::GO:0007265; P:Ras protein signal transduction; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
726P62872    340   GBB1_CANFA Guanine nucleotide-binding protein...1401.4     36.2     27     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
727P62871    340   GBB1_BOVIN Guanine nucleotide-binding protein...1401.4     36.2     27     40GO:0005834; C:heterotrimeric G-protein complex; IDA:BHF-UCL.::GO:0005624; C:membrane fraction; IDA:BHF-UCL.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; IDA:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; IDA:BHF-UCL.::GO:0071380; P:cellular response to prostaglandin E stimulus; IDA:BHF-UCL.
728Q5R5W8    340   GBB1_PONAB Guanine nucleotide-binding protein...1401.4     36.2     27     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
729O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...1021.4     36.2     31     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
730Q18964    415   WDFY2_CAEEL WD repeat and FYVE domain-contain...1261.4     36.2     24     44
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032266; F:phosphatidylinositol-3-phosphate binding; ISS:WormBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006897; P:endocytosis; IMP:WormBase.
731Q91W96    807   APC4_MOUSE Anaphase-promoting complex subunit...901.4     36.6     23     46GO:0005680; C:anaphase-promoting complex; ISS:UniProtKB.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0070979; P:protein K11-linked ubiquitination; ISS:UniProtKB.::GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IEA:InterPro.
732Q86W42    341   THOC6_HUMAN THO complex subunit 6 homolog OS=...1731.4     36.2     24     41GO:0000445; C:THO complex part of transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
733Q9USR0    404   CKN1_SCHPO DNA excision repair protein ckn1 O...1091.4     36.2     27     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0070912; C:Ddb1-Ckn1 complex; IDA:PomBase.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
734C4YPI7    486   LIS1_CANAW Nuclear distribution protein PAC1 ...381.4     36.2     39     66GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
735Q5A7Q6    486   LIS1_CANAL Nuclear distribution protein PAC1 ...381.4     36.2     39     66GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
736Q4QR85    342   MEP50_RAT Methylosome protein 50 OS=Rattus no...1411.4     35.8     21     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
737A9V790    410   LIS1_MONBE Lissencephaly-1 homolog OS=Monosig...1771.5     36.2     20     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
738A2RRH5    827   WDR27_HUMAN WD repeat-containing protein 27 O...671.5     36.2     27     45
739Q39190    479   PRL2_ARATH Protein pleiotropic regulator PRL2...621.5     36.2     32     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
740Q9BRX9    315   WDR83_HUMAN WD repeat domain-containing prote...1481.5     35.8     23     41GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
741O35242    920   FAN_MOUSE Protein FAN OS=Mus musculus (Mouse)...1741.5     36.2     22     41
GO:0005123; F:death receptor binding; TAS:MGI.
742P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...1051.5     35.8     25     49GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
743Q5AXW3    654   MDV1_EMENI Mitochondrial division protein 1 O...771.5     36.2     30     47GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
744Q75DC5    827   ERB1_ASHGO Ribosome biogenesis protein ERB1 O...351.5     36.2     37     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
745Q12024    460   YTM1_YEAST Ribosome biogenesis protein YTM1 O...561.5     36.2     36     55GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051276; P:chromosome organization; IGI:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
746A6ZPA9    460   YTM1_YEAS7 Ribosome biogenesis protein YTM1 O...561.5     36.2     36     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
747P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...1351.6     36.2     21     47
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
748A5DWF4    874   ERB1_LODEL Ribosome biogenesis protein ERB1 O...351.6     36.2     34     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
749O22468    415   MSI2_ARATH WD-40 repeat-containing protein MS...741.6     36.2     28     55GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
750Q7KWL3    445   DCA13_DICDI DDB1- and CUL4-associated factor ...1451.6     36.2     22     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
751Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...1181.6     36.2     29     43
records
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