Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
571Q6C709    441   PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS...410.54     37.4     37     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
572Q9FLX9    473   NLE1_ARATH Notchless protein homolog OS=Arabi...690.55     37.7     25     52GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
573A0JPH4    1311   SCAP_XENLA Sterol regulatory element-binding ...2040.56     37.7     27     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
574Q8N9V3    476   WSDU1_HUMAN WD repeat, SAM and U-box domain-c...1510.57     37.4     21     39GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
575Q8MY12    780   MHCKC_DICDI Myosin heavy chain kinase C OS=Di...1930.57     37.7     19     42GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.::GO:0032154; C:cleavage furrow; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IMP:dictyBase.::GO:0045159; F:myosin II binding; ISS:dictyBase.
GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.
576O60097    526   SPT8_SCHPO Transcription factor spt8 OS=Schiz...1030.58     37.4     26     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.
GO:0017025; F:TBP-class protein binding; ISS:PomBase.::GO:0003712; F:transcription cofactor activity; ISS:PomBase.
GO:0048096; P:chromatin-mediated maintenance of transcription; IC:PomBase.::GO:0016573; P:histone acetylation; IC:PomBase.::GO:0010590; P:regulation of cytokinetic cell separation; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
577Q14137    746   BOP1_HUMAN Ribosome biogenesis protein BOP1 O...1650.59     37.7     22     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; NAS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0051726; P:regulation of cell cycle; IMP:UniProtKB.
578Q54ZP5    1172   WDR48_DICDI WD repeat-containing protein 48 h...960.6     37.7     29     48
579Q5B563    309   SEC13_EMENI Protein transport protein sec13 O...1010.6     37     33     50GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
580Q5REE0    518   UTP15_PONAB U3 small nucleolar RNA-associated...650.61     37.4     25     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
581P39706    426   SWD1_YEAST COMPASS component SWD1 OS=Saccharo...710.62     37.4     30     52GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
582Q6CIH3    791   ERB1_KLULA Ribosome biogenesis protein ERB1 O...490.62     37.7     31     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
583Q32KQ2    358   WDR53_BOVIN WD repeat-containing protein 53 O...700.62     37.4     29     53
584O60508    579   PRP17_HUMAN Pre-mRNA-processing factor 17 OS=...710.63     37.4     24     49GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
585Q20168    1000   COPB2_CAEEL Probable coatomer subunit beta' O...1250.63     37.7     25     45GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048599; P:oocyte development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
586Q8TED0    518   UTP15_HUMAN U3 small nucleolar RNA-associated...650.63     37.4     25     49GO:0005737; C:cytoplasm; IDA:LIFEdb.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
587Q8VZY6    379   FIE2_MAIZE Polycomb group protein FIE2 OS=Zea...670.63     37.4     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
588A8XEN7    554   DCA11_CAEBR DDB1- and CUL4-associated factor ...560.64     37.4     43     54
GO:0008340; P:determination of adult lifespan; ISS:UniProtKB.
589O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...1210.65     37.7     22     41GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
590Q93134    316   GBLP_BIOGL Guanine nucleotide-binding protein...2810.66     37     25     38
591Q9DC48    579   PRP17_MOUSE Pre-mRNA-processing factor 17 OS=...710.66     37.4     24     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
592O55029    905   COPB2_MOUSE Coatomer subunit beta' OS=Mus mus...2090.66     37.4     22     41
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
593B9WD30    489   LIS1_CANDC Nuclear distribution protein PAC1 ...380.66     37.4     42     63GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
594Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...620.67     37.4     37     53
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
595Q4P8R5    814   MDV1_USTMA Mitochondrial division protein 1 O...440.67     37.4     39     61GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
596P53197    566   CDH1_YEAST APC/C activator protein CDH1 OS=Sa...1420.67     37.4     21     44GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0010997; F:anaphase-promoting complex binding; IDA:SGD.::GO:0030332; F:cyclin binding; IDA:SGD.::GO:0097027; F:ubiquitin-protein ligase activator activity; IDA:SGD.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; IMP:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010697; P:negative regulation of spindle pole body separation; IMP:SGD.::GO:2000600; P:positive regulation of cyclin catabolic process; IDA:SGD.::GO:2000060; P:positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0008361; P:regulation of cell size; IMP:SGD.
597O94620    340   CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS...1410.68     37     22     48GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
598O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...1590.68     37     19     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
599B6Q4Z5    660   SCONB_PENMQ Probable E3 ubiquitin ligase comp...1520.68     37.4     23     43
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
600P40042    185   RRT13_YEAST Regulator of rDNA transcription p...410.69     36.2     39     63
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
601Q8BHB4    942   WDR3_MOUSE WD repeat-containing protein 3 OS=...710.7     37.4     32     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
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