Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541Q8C5V5    780   WDR27_MOUSE WD repeat-containing protein 27 O...550.42     38.1     35     53
542Q6DFC6    832   WDR75_XENLA WD repeat-containing protein 75 O...690.43     38.1     30     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003824; F:catalytic activity; IEA:InterPro.
543Q6H8D5    910   COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza...2080.44     38.1     22     41GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
544P0CS44    757   MDV1_CRYNJ Mitochondrial division protein 1 O...540.45     38.1     37     56GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
545P0CS45    757   MDV1_CRYNB Mitochondrial division protein 1 O...540.45     38.1     37     56GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
546Q9T014    1036   SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidop...1470.45     38.1     22     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:TAIR.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
547Q3U3T8    1523   WDR62_MOUSE WD repeat-containing protein 62 O...610.45     38.1     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0021987; P:cerebral cortex development; ISS:UniProtKB.
548Q9DAJ4    315   WDR83_MOUSE WD repeat domain-containing prote...2030.46     37.4     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
549Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...2010.46     37.7     19     38
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
550A7MB12    519   UTP15_BOVIN U3 small nucleolar RNA-associated...650.46     37.7     25     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
551Q802W4    722   NOL10_DANRE Nucleolar protein 10 OS=Danio rer...1200.47     38.1     28     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
552Q8VC51    532   WAP53_MOUSE Telomerase Cajal body protein 1 O...1470.47     37.7     25     43GO:0015030; C:Cajal body; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005697; C:telomerase holoenzyme complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0051973; P:positive regulation of telomerase activity; ISS:UniProtKB.::GO:0032203; P:telomere formation via telomerase; ISS:UniProtKB.
553Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...670.48     38.1     34     45GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
554B4P528    784   BOP1_DROYA Ribosome biogenesis protein BOP1 h...1510.48     38.1     23     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
555B4MYI5    778   BOP1_DROWI Ribosome biogenesis protein BOP1 h...1700.48     38.1     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
556A6R3K5    490   YTM1_AJECN Ribosome biogenesis protein YTM1 O...1700.48     37.7     28     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
557A1DDL6    658   MDV1_NEOFI Mitochondrial division protein 1 O...1760.49     37.7     24     35GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
558Q00659    678   SCONB_EMENI Probable E3 ubiquitin ligase comp...1620.49     37.7     24     42
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
559Q9UUG8    598   TUP12_SCHPO Transcriptional repressor tup12 O...1690.5     37.7     23     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042393; F:histone binding; IDA:PomBase.::GO:0003714; F:transcription corepressor activity; IDA:PomBase.
GO:0043156; P:chromatin remodeling in response to cation stress; IMP:PomBase.::GO:0006342; P:chromatin silencing; IMP:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
560Q6FLA4    805   ERB1_CANGA Ribosome biogenesis protein ERB1 O...780.5     37.7     26     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
561Q6BYU4    985   HIR1_DEBHA Protein HIR1 OS=0083 / IGC 2968) (...1830.5     38.1     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
562Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...1060.5     37.7     24     45GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
563Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...1580.51     37.7     23     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
564Q9NWT1    392   PK1IP_HUMAN p21-activated protein kinase-inte...2120.52     37.4     23     37GO:0005634; C:nucleus; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
565Q8N1V2    620   WDR16_HUMAN WD repeat-containing protein 16 O...1390.52     37.7     23     42GO:0005737; C:cytoplasm; IDA:HPA.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.
566P38123    315   SWD3_YEAST COMPASS component SWD3 OS=Saccharo...1590.52     37.4     23     38GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
567P53699    684   CDC4_CANAX Cell division control protein 4 OS...590.52     37.7     31     54
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
568Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...1340.53     37.4     25     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
569Q9Y1C1    664   EMAP_LYTVA 77 kDa echinoderm microtubule-asso...1730.53     37.7     20     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
570A8XXC7    417   WDFY2_CAEBR WD repeat and FYVE domain-contain...1500.53     37.4     23     44
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
571Q6C709    441   PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS...410.54     37.4     37     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
records
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