Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511Q9HAD4    459   WDR41_HUMAN WD repeat-containing protein 41 O...1590.3     38.5     26     40
512Q17LZ2    866   BOP1_AEDAE Ribosome biogenesis protein BOP1 h...1710.31     38.5     23     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
513Q6BRG6    811   ERB1_DEBHA Ribosome biogenesis protein ERB1 O...540.31     38.5     30     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
514Q58DT8    382   WDR55_BOVIN WD repeat-containing protein 55 O...1420.31     38.1     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
515Q7KWK5    514   PRP19_DICDI Pre-mRNA-processing factor 19 hom...1160.31     38.5     24     44GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:dictyBase.::GO:0000151; C:ubiquitin ligase complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase.
516Q7ZUV2    694   KTNB1_DANRE Katanin p80 WD40-containing subun...1140.32     38.5     24     47GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
517Q6PBD6    305   WDR61_XENTR WD repeat-containing protein 61 O...1800.33     38.1     21     42GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
518P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...1130.33     38.1     20     42GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
519Q7TNG5    649   EMAL2_MOUSE Echinoderm microtubule-associated...1220.33     38.5     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003824; F:catalytic activity; IEA:InterPro.
520O13046    1127   WDHD1_XENLA WD repeat and HMG-box DNA-binding...1580.33     38.5     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
521Q22006    529   PRO1_CAEEL Pre-rRNA-processing protein pro-1 ...1580.33     38.5     20     42GO:0005654; C:nucleoplasm; ISS:WormBase.
GO:0016477; P:cell migration; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0007506; P:gonadal mesoderm development; IEA:UniProtKB-KW.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0006364; P:rRNA processing; IMP:WormBase.
522Q9H2Y7    1883   ZF106_HUMAN Zinc finger protein 106 homolog O...730.33     38.5     33     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
523Q54LT8    293   STRAP_DICDI Serine-threonine kinase receptor-...1290.34     37.7     25     40
GO:0004872; F:receptor activity; ISS:dictyBase.
GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; ISS:dictyBase.
524B8M7Q5    667   SCONB_TALSN Probable E3 ubiquitin ligase comp...1480.34     38.5     22     45
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
525A1L112    384   WDR55_RAT WD repeat-containing protein 55 OS=...1420.34     38.1     28     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
526Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...1770.36     38.1     19     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
527Q5BDL3    793   ERB1_EMENI Ribosome biogenesis protein erb1 O...730.36     38.5     26     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
528Q92636    917   FAN_HUMAN Protein FAN OS=Homo sapiens (Human)...1400.37     38.5     23     39GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005625; C:soluble fraction; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005057; F:receptor signaling protein activity; TAS:ProtInc.
GO:0006672; P:ceramide metabolic process; TAS:ProtInc.
529Q09855    506   POF11_SCHPO F-box/WD repeat-containing protei...540.37     38.1     37     57GO:0005829; C:cytosol; IDA:PomBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
530Q4WP10    488   YTM1_ASPFU Ribosome biogenesis protein ytm1 O...1870.37     38.1     26     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
531B0Y5V6    488   YTM1_ASPFC Ribosome biogenesis protein ytm1 O...1870.37     38.1     26     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
532C6L7U1    1485   LIN1_LOTJA Putative E3 ubiquitin-protein liga...1550.37     38.5     28     46GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0009877; P:nodulation; IEA:UniProtKB-KW.
533Q9H6Y2    383   WDR55_HUMAN WD repeat-containing protein 55 O...3220.38     38.1     19     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
534P17343    340   GBB1_CAEEL Guanine nucleotide-binding protein...1340.4     37.7     24     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0040013; P:negative regulation of locomotion; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.
535Q61ZF6    340   GBB1_CAEBR Guanine nucleotide-binding protein...1340.4     37.7     24     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
536Q01277    650   SCONB_NEUCR Probable E3 ubiquitin ligase comp...1120.4     38.1     29     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
537Q149M9    1564   NWD1_HUMAN NACHT and WD repeat domain-contain...1610.4     38.5     24     37
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
538Q8IV35    697   WDR49_HUMAN WD repeat-containing protein 49 O...700.4     38.1     33     49
539A8PWB6    642   BOP1_BRUMA Ribosome biogenesis protein BOP1 h...650.41     38.1     34     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
540Q95JL5    571   WDR16_MACFA WD repeat-containing protein 16 O...1390.42     38.1     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
541Q8C5V5    780   WDR27_MOUSE WD repeat-containing protein 27 O...550.42     38.1     35     53
records
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