Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...3120.059     40.8     21     39
362A8ID74    797   BOP1_CHLRE Ribosome biogenesis protein BOP1 h...720.06     40.8     25     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
363B3P4F8    498   WDR55_DROER WD repeat-containing protein 55 h...800.061     40.8     26     54
364Q9C1X0    297   YN55_SCHPO Uncharacterized WD repeat-containi...1580.064     40     22     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
365Q6DTM3    1047   AHI1_RAT Jouberin OS=Rattus norvegicus (Rat)....940.064     40.8     27     47GO:0005912; C:adherens junction; ISS:UniProtKB.::GO:0005911; C:cell-cell junction; ISS:UniProtKB.::GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.::GO:0036038; C:TCTN-B9D complex; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0035844; P:cloaca development; ISS:UniProtKB.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0030902; P:hindbrain development; ISS:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0071599; P:otic vesicle development; ISS:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; ISS:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; ISS:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; ISS:UniProtKB.::GO:0050795; P:regulation of behavior; ISS:UniProtKB.::GO:0010842; P:retina layer formation; ISS:UniProtKB.::GO:0065001; P:specification of axis polarity; ISS:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; ISS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; ISS:UniProtKB.
366A1CQI9    788   ERB1_ASPCL Ribosome biogenesis protein erb1 O...730.065     40.8     27     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
367B4PU14    499   WDR55_DROYA WD repeat-containing protein 55 h...800.065     40.4     26     54
368Q6PH57    340   GBB1_DANRE Guanine nucleotide-binding protein...1370.066     40.4     27     42
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
369P97452    732   BOP1_MOUSE Ribosome biogenesis protein BOP1 O...1650.067     40.8     25     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043021; F:ribonucleoprotein complex binding; IDA:MGI.
GO:0008283; P:cell proliferation; IMP:UniProtKB.::GO:0000448; P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
370Q9UT85    507   YIPC_SCHPO Uncharacterized WD repeat-containi...2170.067     40.4     23     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0034657; C:GID complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0045721; P:negative regulation of gluconeogenesis; ISS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:PomBase.
371Q7ZX22    780   WDR24_XENLA WD repeat-containing protein 24 O...2070.067     40.8     22     40
372Q2KJJ5    800   TBL3_BOVIN Transducin beta-like protein 3 OS=...2200.067     40.8     22     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
373O13878    806   UTP17_SCHPO U3 small nucleolar RNA-associated...3020.068     40.8     23     40GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0034455; C:t-UTP complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
374Q803D2    410   LIS1B_DANRE Lissencephaly-1 homolog B OS=Dani...570.069     40.4     35     51GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0045176; P:apical protein localization; IMP:ZFIN.::GO:0048854; P:brain morphogenesis; IMP:ZFIN.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0040023; P:establishment of nucleus localization; IMP:ZFIN.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045494; P:photoreceptor cell maintenance; IMP:ZFIN.::GO:0006810; P:transport; IEA:UniProtKB-KW.
375O13982    399   YEC8_SCHPO Uncharacterized WD repeat-containi...550.071     40.4     38     55GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
376Q93847    395   YZLL_CAEEL Uncharacterized WD repeat-containi...2080.072     40.4     23     45
377Q6P2Y2    415   WDR69_XENTR Outer row dynein assembly protein...1360.072     40.4     21     44GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
378O14301    595   YE85_SCHPO Uncharacterized WD repeat-containi...1360.072     40.4     21     45GO:0030479; C:actin cortical patch; ISS:PomBase.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0030042; P:actin filament depolymerization; ISS:PomBase.
379P53851    422   TEX1_YEAST Protein TEX1 OS=Saccharomyces cere...1620.073     40.4     23     43GO:0000346; C:transcription export complex; IPI:SGD.
GO:0006406; P:mRNA export from nucleus; IC:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
380B3MHX6    793   BOP1_DROAN Ribosome biogenesis protein BOP1 h...1700.074     40.4     23     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
381B4J9K1    786   BOP1_DROGR Ribosome biogenesis protein BOP1 h...1700.074     40.4     23     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
382Q6NV31    313   WDR82_DANRE WD repeat-containing protein 82 O...2140.074     40     22     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
383Q499N3    431   WDR18_RAT WD repeat-containing protein 18 OS=...1550.074     40.4     20     39
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
384Q6NVM6    686   NOL10_XENTR Nucleolar protein 10 OS=Xenopus t...1050.074     40.4     27     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
385Q8TEQ6    1508   GEMI5_HUMAN Gem-associated protein 5 OS=Homo ...1000.075     40.8     29     52GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0017069; F:snRNA binding; IDA:UniProtKB.
GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0006461; P:protein complex assembly; TAS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; TAS:UniProtKB.
386Q5AI86    350   EIF3I_CANAL Eukaryotic translation initiation...970.075     40     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0035690; P:cellular response to drug; IMP:CGD.
387B4HN85    784   BOP1_DROSE Ribosome biogenesis protein BOP1 h...1510.078     40.4     23     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
388Q4VBE8    431   WDR18_MOUSE WD repeat-containing protein 18 O...1510.078     40     21     40
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
389A1C7E4    700   SCONB_ASPCL Probable E3 ubiquitin ligase comp...1590.079     40.4     23     42
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
390P54313    340   GBB2_RAT Guanine nucleotide-binding protein G...1320.081     40     28     42GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.::GO:0043234; C:protein complex; IDA:RGD.
GO:0005246; F:calcium channel regulator activity; IMP:RGD.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
391P62880    340   GBB2_MOUSE Guanine nucleotide-binding protein...1320.081     40     28     42GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
records
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