Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331A1CBP8    655   MDV1_ASPCL Mitochondrial division protein 1 O...1860.037     41.6     23     35GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
332Q5ZLK1    445   DCA13_CHICK DDB1- and CUL4-associated factor ...1020.037     41.2     27     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
333Q6TNS2    368   PK1IP_DANRE p21-activated protein kinase-inte...1830.039     41.2     21     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
334Q26613    686   EMAP_STRPU 77 kDa echinoderm microtubule-asso...1730.039     41.6     21     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
335Q5ZJH5    305   WDR61_CHICK WD repeat-containing protein 61 O...1800.041     40.8     22     43GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
336Q8K3E5    1047   AHI1_MOUSE Jouberin OS=Mus musculus (Mouse). ...940.041     41.6     28     47GO:0005912; C:adherens junction; ISS:UniProtKB.::GO:0005911; C:cell-cell junction; ISS:UniProtKB.::GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0036038; C:TCTN-B9D complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.::GO:0035844; P:cloaca development; IGI:UniProtKB.::GO:0001947; P:heart looping; IGI:UniProtKB.::GO:0030902; P:hindbrain development; IGI:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; IMP:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:0071599; P:otic vesicle development; IGI:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; IGI:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; IMP:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; IGI:UniProtKB.::GO:0033365; P:protein localization to organelle; IMP:UniProtKB.::GO:0050795; P:regulation of behavior; IMP:UniProtKB.::GO:0010842; P:retina layer formation; IGI:UniProtKB.::GO:0065001; P:specification of axis polarity; IGI:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; IMP:UniProtKB.::GO:0016192; P:vesicle-mediated transport; IMP:UniProtKB.
337Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...2120.043     41.6     21     42GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
338Q12788    808   TBL3_HUMAN Transducin beta-like protein 3 OS=...2060.043     41.2     23     41GO:0005730; C:nucleolus; IDA:HPA.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0005057; F:receptor signaling protein activity; TAS:ProtInc.
GO:0007199; P:G-protein signaling, coupled to cGMP nucleotide second messenger; TAS:ProtInc.::GO:0006364; P:rRNA processing; IEA:InterPro.
339B5X3C4    410   LIS1B_SALSA Lissencephaly-1 homolog B OS=Salm...1820.045     40.8     23     37GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
340Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...1970.045     41.2     23     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
341Q6DDI6    1089   WDR67_XENLA WD repeat-containing protein 67 O...950.045     41.2     31     51GO:0005622; C:intracellular; IEA:InterPro.
GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
342Q8YV57    1683   Y2124_NOSS1 Uncharacterized WD repeat-contain...4800.046     41.6     20     40
GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
343Q0CY32    673   SCONB_ASPTN Probable E3 ubiquitin ligase comp...1120.046     41.2     27     48
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
344Q5R4T8    445   DCA13_PONAB DDB1- and CUL4-associated factor ...950.046     40.8     29     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
345Q7ZVR1    832   WDR75_DANRE WD repeat-containing protein 75 O...690.046     41.2     32     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
346Q9NV06    445   DCA13_HUMAN DDB1- and CUL4-associated factor ...950.047     40.8     29     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
347A3LX18    350   EIF3I_PICST Eukaryotic translation initiation...970.047     40.8     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
348A7THX0    706   MDV1_VANPO Mitochondrial division protein 1 O...1440.048     41.2     22     47GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
349O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...2140.049     41.2     22     37
350A2CEH0    490   POC1B_DANRE POC1 centriolar protein homolog B...670.05     40.8     30     54
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0060287; P:epithelial cilium movement involved in determination of left/right asymmetry; IMP:ZFIN.::GO:0003014; P:renal system process; IMP:ZFIN.
351Q7T0Q5    689   NOL10_XENLA Nucleolar protein 10 OS=Xenopus l...1160.05     41.2     27     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
352Q5SRY7    542   FBW1B_MOUSE F-box/WD repeat-containing protei...950.051     40.8     33     52GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0042347; P:negative regulation of NF-kappaB import into nucleus; IMP:UniProtKB.::GO:0042753; P:positive regulation of circadian rhythm; IMP:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006470; P:protein dephosphorylation; IDA:UniProtKB.::GO:0031648; P:protein destabilization; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
353B4QTL6    498   WDR55_DROSI WD repeat-containing protein 55 h...800.053     40.8     26     54
354Q5ZMV9    705   WDR24_CHICK WD repeat-containing protein 24 O...2020.053     41.2     22     40
355Q5APF0    466   YTM1_CANAL Ribosome biogenesis protein YTM1 O...1260.054     40.8     26     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0030447; P:filamentous growth; IMP:CGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
356B0WC36    861   BOP1_CULQU Ribosome biogenesis protein BOP1 h...1710.055     41.2     24     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
357Q8T088    498   WDR55_DROME WD repeat-containing protein 55 h...800.055     40.8     26     54
358Q8VZS9    475   FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabido...1420.056     40.8     21     46GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0032877; P:positive regulation of DNA endoreduplication; IMP:TAIR.
359A5DST9    491   YTM1_LODEL Ribosome biogenesis protein YTM1 O...1220.056     40.8     27     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
360A6RRD4    763   ERB1_BOTFB Ribosome biogenesis protein erb1 O...1720.058     40.8     26     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
361Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...3120.059     40.8     21     39
records
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