Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301Q9HAV0    340   GBB4_HUMAN Guanine nucleotide-binding protein...1390.027     41.6     30     42GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.
302Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...3130.027     42     23     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
303Q6FLI3    579   CAF4_CANGA CCR4-associated factor 4 homolog O...1440.027     42     28     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
304Q5XGI5    314   WDR83_XENTR WD repeat domain-containing prote...1360.028     41.2     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
305A7EF03    335   EIF3I_SCLS1 Eukaryotic translation initiation...1000.028     41.6     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
306P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...1680.029     42     21     43GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
307Q6NZH4    410   LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus...3400.029     41.6     20     40GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
308Q9UKB1    542   FBW1B_HUMAN F-box/WD repeat-containing protei...950.029     41.6     33     52GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0042753; P:positive regulation of circadian rhythm; ISS:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006470; P:protein dephosphorylation; ISS:UniProtKB.::GO:0031648; P:protein destabilization; IMP:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
309Q8YRI1    1526   YY46_NOSS1 Uncharacterized WD repeat-containi...1040.03     42     26     47
310A0JMQ0    777   BOP1_DANRE Ribosome biogenesis protein bop1 O...1750.03     42     22     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
311A6ZQL5    714   MDV1_YEAS7 Mitochondrial division protein 1 O...1680.031     42     26     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
312Q8IZU2    1322   WDR17_HUMAN WD repeat-containing protein 17 O...1510.031     42     25     44
313Q8YTC2    1258   Y2800_NOSS1 Uncharacterized WD repeat-contain...1920.032     42     22     42
GO:0043531; F:ADP binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:InterPro.
314D1ZEB4    460   LIS11_SORMK Nuclear distribution protein PAC1...710.032     41.6     35     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
315Q229Z6    634   POC1_TETTS POC1 centriolar protein homolog OS...840.033     41.6     31     45GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0051297; P:centrosome organization; IMP:UniProtKB.
316Q562C2    731   BOP1_RAT Ribosome biogenesis protein BOP1 OS=...1650.033     41.6     25     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
317P49178    380   GBB_MAIZE Guanine nucleotide-binding protein ...680.033     41.2     34     49
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
318Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...1300.034     41.6     22     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
319P07834    779   CDC4_YEAST Cell division control protein 4 OS...510.034     41.6     37     63GO:0016363; C:nuclear matrix; IDA:SGD.::GO:0043224; C:nuclear SCF ubiquitin ligase complex; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IGI:SGD.::GO:0007126; P:meiosis; IMP:SGD.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
320Q9BV38    432   WDR18_HUMAN WD repeat-containing protein 18 O...1510.034     41.6     23     39
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
321Q2KIY3    410   WDFY1_BOVIN WD repeat and FYVE domain-contain...1460.034     41.2     21     43GO:0005769; C:early endosome; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
322O14186    846   YDSB_SCHPO Uncharacterized WD repeat-containi...2250.034     41.6     21     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0005778; C:peroxisomal membrane; NAS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
323Q54MT0    331   EIF3I_DICDI Eukaryotic translation initiation...1080.034     41.2     29     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006446; P:regulation of translational initiation; ISS:dictyBase.
324Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...2560.035     41.2     22     40GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
325Q4WLM7    467   LIS1_ASPFU Nuclear distribution protein nudF ...1320.035     41.2     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
326B0XM00    467   LIS1_ASPFC Nuclear distribution protein nudF ...1320.035     41.2     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
327Q9FE91    419   C3H62_ARATH Zinc finger CCCH domain-containin...2830.035     41.2     22     35
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
328Q7PTC5    865   BOP1_ANOGA Ribosome biogenesis protein BOP1 h...1710.036     41.6     23     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
329Q8NHV4    660   NEDD1_HUMAN Protein NEDD1 OS=Homo sapiens (Hu...1880.036     41.6     22     43GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000086; P:G2/M transition of mitotic cell cycle; TAS:Reactome.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
330B7PS00    411   LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes ...2370.037     41.2     21     37GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
331A1CBP8    655   MDV1_ASPCL Mitochondrial division protein 1 O...1860.037     41.6     23     35GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
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