Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR409C
Length:
939
Number of sequences:
5887
Description:
YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271O95834    649   EMAL2_HUMAN Echinoderm microtubule-associated...1820.015     42.7     21     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005875; C:microtubule associated complex; TAS:ProtInc.
GO:0003824; F:catalytic activity; IEA:InterPro.
GO:0007605; P:sensory perception of sound; TAS:ProtInc.::GO:0007601; P:visual perception; TAS:ProtInc.
272Q6NXY1    996   WDR67_MOUSE WD repeat-containing protein 67 O...1120.015     42.7     27     46
GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
273Q3B7M6    659   NEDD1_BOVIN Protein NEDD1 OS=Bos taurus (Bovi...1880.016     42.7     23     43
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
274P93107    606   PF20_CHLRE Flagellar WD repeat-containing pro...1990.017     42.7     20     38GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IEA:UniProtKB-SubCell.
275P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...1610.017     42.7     23     47GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
276Q54S59    299   WDR61_DICDI WD repeat-containing protein 61 h...2220.018     42     22     40
277Q9BQA1    342   MEP50_HUMAN Methylosome protein 50 OS=Homo sa...1410.018     42     21     44GO:0005829; C:cytosol; TAS:Reactome.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IGI:MGI.
GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IGI:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0000387; P:spliceosomal snRNP assembly; TAS:Reactome.
278Q20059    683   WDR48_CAEEL WD repeat-containing protein 48 h...1660.018     42.7     23     45
279Q6CJ50    705   MDV1_KLULA Mitochondrial division protein 1 O...1440.019     42.4     30     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
280Q6P1V3    422   WSB1_XENTR WD repeat and SOCS box-containing ...1440.019     42.4     24     44
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
281Q10272    446   IPI3_SCHPO Pre-rRNA-processing protein crb3/i...1760.019     42.4     23     41GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
282B5X9P2    330   CIO1A_SALSA Probable cytosolic iron-sulfur pr...1680.019     42     21     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
283Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...930.02     42.4     33     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
284Q7RXH4    346   EIF3I_NEUCR Eukaryotic translation initiation...960.02     42     29     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
285Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...1830.021     42.4     22     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
286Q4ICM0    464   LIS1_GIBZE Nuclear distribution protein PAC1 ...1500.021     42     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
287P47025    714   MDV1_YEAST Mitochondrial division protein 1 O...1680.021     42.4     26     42GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.
288Q08924    1013   WDR6_YEAST Regulator of Ty1 transposition pro...510.022     42.4     35     55GO:0005768; C:endosome; IDA:SGD.
GO:0032456; P:endocytic recycling; IMP:SGD.
289Q9NRL3    753   STRN4_HUMAN Striatin-4 OS=Homo sapiens (Human...1890.023     42.4     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
290P58404    760   STRN4_MOUSE Striatin-4 OS=Mus musculus (Mouse...2160.024     42.4     19     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
291Q40687    380   GBB_ORYSJ Guanine nucleotide-binding protein ...680.024     42     34     49
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IEP:Gramene.
292Q1DPU4    340   EIF3I_COCIM Eukaryotic translation initiation...940.024     41.6     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
293B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...1680.024     41.6     21     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
294Q5FWQ6    415   WDR69_XENLA Outer row dynein assembly protein...1360.025     42     22     43GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
295A1CUD6    467   LIS11_ASPCL Nuclear distribution protein nudF...1380.025     42     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
296Q90ZL4    410   LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus...3400.026     41.6     20     40GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
297Q9VAT2    621   DCA10_DROME DDB1- and CUL4-associated factor ...910.026     42     31     49
298Q29RL0    1063   WDR67_BOVIN WD repeat-containing protein 67 O...1120.026     42     27     46
GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
299A1DP19    441   LIS1_NEOFI Nuclear distribution protein nudF ...1320.027     41.6     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
300Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1610.027     41.6     24     42GO:0005730; C:nucleolus; IDA:HPA.
301Q9HAV0    340   GBB4_HUMAN Guanine nucleotide-binding protein...1390.027     41.6     30     42GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.
records
Previous ‹‹ ›› Next Total records: 1000 271 - 300
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::