Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR401C
Length:
668
Number of sequences:
5887
Description:
YLR401C DUS3 SGDID:S000004393, Chr XII from 924448-922442, Genome Release 64-1-1, reverse complement, Verified ORF, "Dihydrouridine synthase, member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; contains a consensus oleate response element (ORE) in its promoter region"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151Q9C9N3    310   C3H14_ARATH Zinc finger CCCH domain-containin...630.079     39.3     29     52
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
152Q9UPT8    1303   ZC3H4_HUMAN Zinc finger CCCH domain-containin...1280.092     39.7     27     46
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
153P47980    436   TIS1_DROME Protein TIS11 OS=Drosophila melano...550.1     39.3     31     56GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016246; P:RNA interference; IMP:FlyBase.
154Q8BQZ5    211   CPSF4_MOUSE Cleavage and polyadenylation spec...770.19     37.7     32     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
155Q6ZPZ3    1304   ZC3H4_MOUSE Zinc finger CCCH domain-containin...1150.21     38.5     28     44
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
156Q9XUB2    468   MEX5_CAEEL Zinc finger protein mex-5 OS=Caeno...680.38     37.4     31     46GO:0005813; C:centrosome; IDA:WormBase.::GO:0043186; C:P granule; IDA:WormBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003730; F:mRNA 3'-UTR binding; IDA:WormBase.::GO:0008187; F:poly-pyrimidine tract binding; IDA:WormBase.::GO:0019904; F:protein domain specific binding; IPI:WormBase.::GO:0019901; F:protein kinase binding; IPI:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0032880; P:regulation of protein localization; IMP:WormBase.
157P47976    325   CTH1_YEAST mRNA decay factor CTH1 OS=Saccharo...510.43     37     37     53GO:0005634; C:nucleus; IC:SGD.
GO:0003729; F:mRNA binding; ISS:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006879; P:cellular iron ion homeostasis; IGI:SGD.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IGI:SGD.
158Q6FTE5    307   TPC1_CANGA Mitochondrial thiamine pyrophospha...1360.52     36.6     26     41GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0055085; P:transmembrane transport; IEA:InterPro.
159A8GKR9    292   HSLO_SERP5 33 kDa chaperonin OS=Serratia prot...791     35.8     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
160Q4VBT5    439   MKRN1_DANRE Probable E3 ubiquitin-protein lig...821     36.2     29     49
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
161Q6L5G1    343   C3H39_ORYSJ Zinc finger CCCH domain-containin...571.2     35.8     28     47
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
162P47979    404   ZFS1_SCHPO Zinc finger protein zfs1 OS=Schizo...631.2     35.8     30     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0035925; F:mRNA 3'-UTR AU-rich region binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0006402; P:mRNA catabolic process; IMP:PomBase.::GO:0031030; P:negative regulation of septation initiation signaling cascade; IGI:PomBase.::GO:0000750; P:pheromone-dependent signal transduction involved in conjugation with cellular fusion; IMP:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IGI:PomBase.
163Q6CZP6    289   HSLO_ERWCT 33 kDa chaperonin OS=BAA-672) (Pec...761.2     35.4     25     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
164O48772    453   C3H26_ARATH Zinc finger CCCH domain-containin...781.6     35.4     24     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; TAS:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
165Q9FNZ2    430   C3H48_ARATH Zinc finger CCCH domain-containin...811.6     35.4     27     47
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
166Q10MN8    457   C3H21_ORYSJ Putative zinc finger CCCH domain-...861.6     35.4     29     43
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
167Q86B79    599   UNK_DROME RING finger protein unkempt OS=Dros...831.7     35.4     27     43GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0008407; P:chaeta morphogenesis; IMP:UniProtKB.::GO:0048749; P:compound eye development; IMP:FlyBase.::GO:0007476; P:imaginal disc-derived wing morphogenesis; IMP:UniProtKB.::GO:0002164; P:larval development; IMP:UniProtKB.
168Q9PGB5    340   DUSA_XYLFA tRNA-dihydrouridine synthase A OS=...2831.8     35     25     39
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
169P22893    319   TTP_MOUSE Tristetraprolin OS=Mus musculus (Mo...691.9     35     28     48GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0007243; P:intracellular protein kinase cascade; IDA:MGI.::GO:0050728; P:negative regulation of inflammatory response; IMP:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:MGI.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.::GO:0050779; P:RNA destabilization; IMP:MGI.
170Q8BL48    810   UNK_MOUSE RING finger protein unkempt homolog...871.9     35.4     29     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
171Q8BYK8    1177   ZC3H6_MOUSE Zinc finger CCCH domain-containin...902.2     35.4     31     43
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
172Q5FWH2    727   UNKL_MOUSE Putative E3 ubiquitin-protein liga...662.3     35     32     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
173Q9QXP6    481   MKRN1_MOUSE E3 ubiquitin-protein ligase makor...842.5     35     27     43
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
174P26156    465   CHLN_MARPO Light-independent protochlorophyll...792.6     34.7     33     52GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0016730; F:oxidoreductase activity, acting on iron-sulfur proteins as donors; IEA:InterPro.
GO:0015995; P:chlorophyll biosynthetic process; IEA:UniProtKB-KW.::GO:0019685; P:photosynthesis, dark reaction; IEA:InterPro.
175Q2NI73    295   PDXS_METST Pyridoxal biosynthesis lyase PdxS ...1002.8     34.3     28     51
GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
GO:0042823; P:pyridoxal phosphate biosynthetic process; IEA:InterPro.
176Q94AD9    404   C3H3_ARATH Zinc finger CCCH domain-containing...602.8     34.7     28     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
177Q5NU14    429   MKRN1_TAKRU Probable E3 ubiquitin-protein lig...752.9     34.7     32     44
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
178Q9C0B0    810   UNK_HUMAN RING finger protein unkempt homolog...873.1     34.7     29     40
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
179Q87AY2    332   DUSA_XYLFT tRNA-dihydrouridine synthase A OS=...1513.2     34.3     30     43
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
180Q6EE22    810   UNK_CANFA RING finger protein unkempt homolog...873.7     34.7     29     40
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
181P53781    324   TTP_BOVIN Tristetraprolin OS=Bos taurus (Bovi...604.5     33.9     30     52GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0006402; P:mRNA catabolic process; ISS:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.
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