Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR399C
Length:
686
Number of sequences:
5887
Description:
YLR399C BDF1 SGDID:S000004391, Chr XII from 921596-919536, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in transcription initiation at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q6CXW4    516   GCN5_KLULA Histone acetyltransferase GCN5 OS=...1039.6     33.1     24     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
32Q9DE13    2130   BAZ2B_CHICK Bromodomain adjacent to zinc fing...810.0000002     58.5     42     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
33Q84XV2    386   GTE1_ARATH Transcription factor GTE1 OS=Arabi...960.000000008     61.6     33     55GO:0005634; C:nucleus; IDA:TAIR.
GO:0010030; P:positive regulation of seed germination; IMP:TAIR.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
34B7ZS37    1698   BAZ2A_XENLA Bromodomain adjacent to zinc fing...630.00001     52.8     46     60GO:0005677; C:chromatin silencing complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0033553; C:rDNA heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; ISS:UniProtKB.::GO:0006306; P:DNA methylation; ISS:UniProtKB.::GO:0016575; P:histone deacetylation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
35Q8H1D7    487   GTE5_ARATH Transcription factor GTE5, chlorop...870.00001     52     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
36Q91YE5    1889   BAZ2A_MOUSE Bromodomain adjacent to zinc fing...790.001     45.8     34     53GO:0005677; C:chromatin silencing complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0033553; C:rDNA heterochromatin; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; IDA:UniProtKB.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; IDA:UniProtKB.::GO:0006306; P:DNA methylation; IDA:UniProtKB.::GO:0016575; P:histone deacetylation; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
37Q6FTW5    546   GCN5_CANGA Histone acetyltransferase GCN5 OS=...1410.0000000004     66.2     33     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
38Q9UIF9    1905   BAZ2A_HUMAN Bromodomain adjacent to zinc fing...790.002     45.8     34     53GO:0005677; C:chromatin silencing complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0033553; C:rDNA heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; NAS:BHF-UCL.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0000183; P:chromatin silencing at rDNA; ISS:UniProtKB.::GO:0006306; P:DNA methylation; ISS:UniProtKB.::GO:0016575; P:histone deacetylation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; NAS:UniProtKB.
39P45481    2441   CBP_MOUSE CREB-binding protein OS=Mus musculu...940.00000000002     71.6     40     54GO:0000940; C:condensed chromosome outer kinetochore; IDA:MGI.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000123; C:histone acetyltransferase complex; IDA:MGI.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IDA:MGI.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0043426; F:MRF binding; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030718; P:germ-line stem cell maintenance; IMP:MGI.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; TAS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40Q6JHU9    2442   CBP_RAT CREB-binding protein OS=Rattus norveg...940.00000000002     71.6     40     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000123; C:histone acetyltransferase complex; IEA:InterPro.::GO:0005667; C:transcription factor complex; IDA:RGD.
GO:0033613; F:activating transcription factor binding; IPI:RGD.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0043426; F:MRF binding; ISS:UniProtKB.::GO:0042975; F:peroxisome proliferator activated receptor binding; IDA:RGD.::GO:0046332; F:SMAD binding; IPI:RGD.::GO:0003713; F:transcription coactivator activity; TAS:RGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008283; P:cell proliferation; IDA:RGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:RGD.::GO:0033261; P:regulation of S phase; IMP:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
41Q92793    2442   CBP_HUMAN CREB-binding protein OS=Homo sapien...940.00000000002     71.6     40     54GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016604; C:nuclear body; IDA:UniProtKB.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.
GO:0000987; F:core promoter proximal region sequence-specific DNA binding; IDA:BHF-UCL.::GO:0004402; F:histone acetyltransferase activity; IDA:UniProtKB.::GO:0043426; F:MRF binding; IDA:UniProtKB.::GO:0002039; F:p53 binding; IPI:UniProtKB.::GO:0001102; F:RNA polymerase II activating transcription factor binding; TAS:BHF-UCL.::GO:0001078; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription; IDA:BHF-UCL.::GO:0001105; F:RNA polymerase II transcription coactivator activity; TAS:BHF-UCL.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:BHF-UCL.::GO:0004871; F:signal transducer activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0042733; P:embryonic digit morphogenesis; TAS:BHF-UCL.::GO:0042592; P:homeostatic process; NAS:UniProtKB.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0006461; P:protein complex assembly; TAS:ProtInc.::GO:0008589; P:regulation of smoothened signaling pathway; TAS:BHF-UCL.::GO:0001666; P:response to hypoxia; TAS:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
42Q09472    2414   EP300_HUMAN Histone acetyltransferase p300 OS...940.00000000004     70.5     39     54GO:0005813; C:centrosome; IDA:HPA.
GO:0050681; F:androgen receptor binding; IPI:BHF-UCL.::GO:0008013; F:beta-catenin binding; IPI:BHF-UCL.::GO:0001047; F:core promoter binding; IDA:UniProtKB.::GO:0004402; F:histone acetyltransferase activity; IDA:UniProtKB.::GO:0001102; F:RNA polymerase II activating transcription factor binding; IPI:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:UniProtKB.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; IDA:UniProtKB.::GO:0043967; P:histone H4 acetylation; IMP:UniProtKB.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0043923; P:positive regulation by host of viral transcription; IDA:BHF-UCL.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0060765; P:regulation of androgen receptor signaling pathway; IDA:BHF-UCL.::GO:0043627; P:response to estrogen stimulus; IDA:UniProtKB.::GO:0001666; P:response to hypoxia; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43Q7Y214    590   GTE7_ARATH Transcription factor GTE7 OS=Arabi...1250.002     45.1     30     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
44B2RWS6    2415   EP300_MOUSE Histone acetyltransferase p300 OS...940.00000000004     70.5     39     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000123; C:histone acetyltransferase complex; IEA:InterPro.::GO:0005667; C:transcription factor complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; ISS:UniProtKB.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; IMP:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0051216; P:cartilage development; NAS:UniProtKB.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043967; P:histone H4 acetylation; ISS:UniProtKB.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043627; P:response to estrogen stimulus; ISS:UniProtKB.::GO:0001666; P:response to hypoxia; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
45Q9BXF3    1484   CECR2_HUMAN Cat eye syndrome critical region ...960.0000000002     67.8     35     55
GO:0005515; F:protein binding; IPI:HGNC.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0000910; P:cytokinesis; NAS:UniProtKB.::GO:0007010; P:cytoskeleton organization; NAS:UniProtKB.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; TAS:HGNC.::GO:0016192; P:vesicle-mediated transport; NAS:UniProtKB.
46P51123    2129   TAF1_DROME Transcription initiation factor TF...3130.000000000005     73.6     23     39GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0035174; F:histone serine kinase activity; IDA:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.::GO:0001129; F:TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly; IPI:FlyBase.::GO:0008134; F:transcription factor binding; IPI:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016573; P:histone acetylation; IDA:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0046425; P:regulation of JAK-STAT cascade; IMP:FlyBase.::GO:0000117; P:regulation of transcription involved in G2/M-phase of mitotic cell cycle; IMP:FlyBase.
47Q90941    1633   PB1_CHICK Protein polybromo-1 OS=Gallus gallu...1000.008     43.5     28     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48Q8BSQ9    1634   PB1_MOUSE Protein polybromo-1 OS=Mus musculus...1260.008     43.5     26     49GO:0000776; C:kinetochore; IDA:MGI.::GO:0005634; C:nucleus; IC:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0001974; P:blood vessel remodeling; TAS:DFLAT.::GO:0060948; P:cardiac vascular smooth muscle cell development; TAS:DFLAT.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0003349; P:epicardium-derived cardiac endothelial cell differentiation; TAS:DFLAT.::GO:0003007; P:heart morphogenesis; TAS:DFLAT.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB.::GO:0001890; P:placenta development; IMP:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; TAS:DFLAT.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0060979; P:vasculogenesis involved in coronary vascular morphogenesis; TAS:DFLAT.
49Q9AR19    568   GCN5_ARATH Histone acetyltransferase GCN5 OS=...1030.0001     48.9     29     50GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IDA:TAIR.::GO:0010484; F:H3 histone acetyltransferase activity; IDA:TAIR.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0009908; P:flower development; IMP:TAIR.::GO:0045893; P:positive regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0009416; P:response to light stimulus; IMP:TAIR.::GO:0010015; P:root morphogenesis; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
50Q86U86    1689   PB1_HUMAN Protein polybromo-1 OS=Homo sapiens...930.006     43.5     29     52GO:0000228; C:nuclear chromosome; NAS:UniProtKB.
GO:0003682; F:chromatin binding; NAS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006338; P:chromatin remodeling; TAS:UniProtKB.::GO:0007067; P:mitosis; TAS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
51Q12830    3046   BPTF_HUMAN Nucleosome-remodeling factor subun...970.000005     53.9     30     53GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0016589; C:NURF complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IDA:HGNC.::GO:0008134; F:transcription factor binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007420; P:brain development; IMP:HGNC.::GO:0006338; P:chromatin remodeling; IDA:HGNC.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:HGNC.::GO:0006351; P:transcription, DNA-dependent; IMP:HGNC.
52Q338B9    511   GCN5_ORYSJ Histone acetyltransferase GCN5 OS=...800.0002     48.1     33     54
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
53Q80UV9    1891   TAF1_MOUSE Transcription initiation factor TF...1440.25     38.5     26     42GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0045120; C:pronucleus; IDA:MGI.::GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IDA:MGI.::GO:0004402; F:histone acetyltransferase activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
54Q60544    1865   TAF1_MESAU Transcription initiation factor TF...1440.26     38.5     26     42GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; ISS:UniProtKB.
GO:0000080; P:G1 phase of mitotic cell cycle; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
55Q8WZM0    464   GCN5_YARLI Histone acetyltransferase GCN5 OS=...1090.0001     48.5     31     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
56P21675    1872   TAF1_HUMAN Transcription initiation factor TF...1440.23     38.5     26     42GO:0071339; C:MLL1 complex; IDA:UniProtKB.::GO:0005669; C:transcription factor TFIID complex; IDA:BHF-UCL.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; IDA:BHF-UCL.::GO:0004402; F:histone acetyltransferase activity; IDA:UniProtKB.::GO:0002039; F:p53 binding; IPI:BHF-UCL.::GO:0004674; F:protein serine/threonine kinase activity; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:BHF-UCL.::GO:0017025; F:TBP-class protein binding; IPI:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IDA:BHF-UCL.
GO:0000080; P:G1 phase of mitotic cell cycle; IGI:BHF-UCL.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0018105; P:peptidyl-serine phosphorylation; IDA:BHF-UCL.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:BHF-UCL.::GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; ISS:BHF-UCL.::GO:0046777; P:protein autophosphorylation; TAS:UniProtKB.::GO:0000117; P:regulation of transcription involved in G2/M-phase of mitotic cell cycle; ISS:BHF-UCL.::GO:0006974; P:response to DNA damage stimulus; IC:BHF-UCL.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; ISS:BHF-UCL.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
57Q64127    1051   TIF1A_MOUSE Transcription intermediary factor...880.000000005     63.5     38     58GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005719; C:nuclear euchromatin; IDA:MGI.::GO:0005726; C:perichromatin fibrils; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0034056; F:estrogen response element binding; ISS:UniProtKB.::GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; IDA:MGI.::GO:0002039; F:p53 binding; IPI:UniProtKB.::GO:0004672; F:protein kinase activity; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0055074; P:calcium ion homeostasis; IMP:MGI.::GO:0071391; P:cellular response to estrogen stimulus; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IGI:MGI.::GO:0046777; P:protein autophosphorylation; IDA:MGI.::GO:0030163; P:protein catabolic process; IMP:UniProtKB.::GO:0042981; P:regulation of apoptotic process; IMP:UniProtKB.::GO:0031647; P:regulation of protein stability; IMP:UniProtKB.::GO:0070562; P:regulation of vitamin D receptor signaling pathway; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
58Q924W6    1242   TRI66_MOUSE Tripartite motif-containing prote...1320.000000006     63.2     33     47GO:0010369; C:chromocenter; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0042803; F:protein homodimerization activity; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.
59Q56R14    1091   TRI33_XENLA E3 ubiquitin-protein ligase TRIM3...800.00006     50.1     34     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
60Q9UUK2    454   GCN5_SCHPO Histone acetyltransferase gcn5 OS=...1120.00001     52     29     48GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.
GO:0010484; F:H3 histone acetyltransferase activity; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IGI:PomBase.::GO:0044154; P:histone H3-K14 acetylation; TAS:PomBase.::GO:0043971; P:histone H3-K18 acetylation; TAS:PomBase.::GO:0043972; P:histone H3-K23 acetylation; TAS:PomBase.::GO:0043970; P:histone H3-K9 acetylation; TAS:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
61O15016    1216   TRI66_HUMAN Tripartite motif-containing prote...1040.00000006     60.1     36     50GO:0016235; C:aggresome; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0008270; F:zinc ion binding; IEA:InterPro.
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