Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR399C
Length:
686
Number of sequences:
5887
Description:
YLR399C BDF1 SGDID:S000004391, Chr XII from 921596-919536, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in transcription initiation at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121Q3UQU0    596   BRD9_MOUSE Bromodomain-containing protein 9 O...930.007     43.1     24     49
122Q09948    542   RSC4_SCHPO Chromatin structure-remodeling com...600.31     37.7     30     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
123Q7ZUF2    631   BRD9_DANRE Bromodomain-containing protein 9 O...700.33     37.7     26     49
124O88665    651   BRD7_MOUSE Bromodomain-containing protein 7 O...1380.34     37.7     25     43GO:0005634; C:nucleus; IPI:MGI.
GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0002039; F:p53 binding; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB.::GO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
125P32597    1359   STH1_YEAST Nuclear protein STH1/NPS1 OS=Sacch...584.4     34.3     28     48GO:0000775; C:chromosome, centromeric region; IDA:UniProtKB.::GO:0016586; C:RSC complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IDA:UniProtKB.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.::GO:0031055; P:chromatin remodeling at centromere; IMP:SGD.::GO:0007010; P:cytoskeleton organization; IGI:UniProtKB.::GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IMP:UniProtKB.::GO:0007126; P:meiosis; IMP:UniProtKB.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0016584; P:nucleosome positioning; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
126O94421    1680   SNF22_SCHPO SWI/SNF chromatin-remodeling comp...771.9     35.4     29     53GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0005819; C:spindle; IDA:PomBase.::GO:0016514; C:SWI/SNF complex; IDA:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.::GO:0003677; F:DNA binding; IC:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0043044; P:ATP-dependent chromatin remodeling; ISS:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.
127Q8LRK9    1919   TAF1A_ARATH Transcription initiation factor T...1020.024     42     31     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
128Q5R8B0    651   BRD7_PONAB Bromodomain-containing protein 7 O...1260.35     37.7     25     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0002039; F:p53 binding; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0003714; F:transcription corepressor activity; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB.::GO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
129Q9NPI1    651   BRD7_HUMAN Bromodomain-containing protein 7 O...1260.43     37.4     25     45GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0070577; F:histone acetyl-lysine binding; IDA:UniProtKB.::GO:0002039; F:p53 binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.::GO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
130Q9UTN6    1199   SNF21_SCHPO Chromatin structure-remodeling co...980.36     37.7     31     46GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0004003; F:ATP-dependent DNA helicase activity; ISS:PomBase.::GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.::GO:0003677; F:DNA binding; IC:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.
131A8X0L9    1285   TBP7_CAEBR Tat-binding homolog 7 OS=Caenorhab...800.02     42     28     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
132Q20318    1042   LIN49_CAEEL Protein lin-49 OS=Caenorhabditis ...741.1     36.2     28     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0040011; P:locomotion; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
133Q13342    867   LY10_HUMAN Nuclear body protein SP140 OS=Homo...710.025     41.6     38     52GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005635; C:nuclear envelope; TAS:ProtInc.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:ProtInc.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006952; P:defense response; TAS:ProtInc.
134Q54DH8    2310   TAF1_DICDI Transcription initiation factor TF...460.044     40.8     30     57GO:0005669; C:transcription factor TFIID complex; ISS:dictyBase.
GO:0005524; F:ATP binding; ISS:dictyBase.::GO:0004402; F:histone acetyltransferase activity; ISS:dictyBase.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006461; P:protein complex assembly; ISS:dictyBase.::GO:0006468; P:protein phosphorylation; ISS:dictyBase.::GO:0000114; P:regulation of transcription involved in G1 phase of mitotic cell cycle; ISS:dictyBase.
135Q5HYC2    2103   K2026_HUMAN Uncharacterized protein KIAA2026 ...1200.045     40.8     24     42
136Q9H930    580   LY10L_HUMAN Nuclear body protein SP140-like p...600.058     40.4     42     57GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
137P22082    1703   SNF2_YEAST Transcription regulatory protein S...890.089     40     26     46GO:0016514; C:SWI/SNF complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.::GO:0031492; F:nucleosomal DNA binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:SGD.::GO:0044109; P:cellular alcohol catabolic process; IMP:SGD.::GO:0006261; P:DNA-dependent DNA replication; IMP:SGD.::GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0042766; P:nucleosome mobilization; IDA:SGD.::GO:0031496; P:positive regulation of mating type switching; IMP:SGD.::GO:0061412; P:positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation; IMP:SGD.::GO:0042148; P:strand invasion; IMP:SGD.::GO:0005987; P:sucrose catabolic process; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
138Q8R5C8    562   ZMY11_MOUSE Zinc finger MYND domain-containin...590.1     39.3     29     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
139Q15326    562   ZMY11_HUMAN Zinc finger MYND domain-containin...590.13     39.3     29     56GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:2001237; P:negative regulation of extrinsic apoptotic signaling pathway; IMP:UniProtKB.::GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; IMP:UniProtKB.::GO:0046329; P:negative regulation of JNK cascade; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
140Q99MY8    2958   ASH1L_MOUSE Histone-lysine N-methyltransferas...610.98     36.6     28     54GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005923; C:tight junction; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
141Q9NR48    2969   ASH1L_HUMAN Histone-lysine N-methyltransferas...500.27     38.5     36     62GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.::GO:0005923; C:tight junction; TAS:ProtInc.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007267; P:cell-cell signaling; TAS:ProtInc.::GO:0006323; P:DNA packaging; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
142A4YEN4    557   ILVD_METS5 Dihydroxy-acid dehydratase OS=Meta...1800.59     37     23     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0004160; F:dihydroxy-acid dehydratase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0009082; P:branched chain family amino acid biosynthetic process; IEA:UniProtKB-KW.
143O74350    299   BDC1_SCHPO Bromodomain-containing protein 1 O...832.7     34.7     27     45GO:0035267; C:NuA4 histone acetyltransferase complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; NAS:PomBase.
GO:0016573; P:histone acetylation; IC:PomBase.
144P49421    712   DNLJ_RHOMR DNA ligase OS=Rhodothermus marinus...742.8     35     30     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
145C6KTD2    6753   HKNMT_PLAF7 Putative histone-lysine N-methylt...563.5     34.7     34     52
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
146P53236    928   RSC1_YEAST Chromatin structure-remodeling com...415.7     33.9     34     56GO:0016586; C:RSC complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0043044; P:ATP-dependent chromatin remodeling; IC:UniProtKB.::GO:0006303; P:double-strand break repair via nonhomologous end joining; IPI:SGD.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0042173; P:regulation of sporulation resulting in formation of a cellular spore; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
147O14053    902   YC47_SCHPO Uncharacterized WD repeat-containi...1138.1     33.5     29     38GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; NAS:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
records
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