UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YLR397C

Length:

780

Number of sequences:

5887

Description:

YLR397C AFG2 SGDID:S000004389, Chr XII from 914892-912550, Genome Release 64-1-1, reverse complement, Verified ORF, "ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; is essential for pre-60S maturation and release of several preribosome maturation factors; may be involved in degradation of aberrant mRNAs"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
691	A4JF04	423	CLPX_BURVG ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
692	Q39FE9	423	CLPX_BURS3 ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
693	B4EBM2	423	CLPX_BURCJ ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
694	A0K846	423	CLPX_BURCH ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
695	B1JTU9	423	CLPX_BURCC ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
696	Q1BH84	423	CLPX_BURCA ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
697	Q1IHV6	360	RUVB_KORVE Holliday junction ATP-dependent DN...	157	0.004	43.9	29	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
698	B9DNE4	338	RUVB_STACT Holliday junction ATP-dependent DN...	34	0.38	37.4	47	59
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
699	Q0BEF7	423	CLPX_BURCM ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
700	B1YRZ4	423	CLPX_BURA4 ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
701	Q3ZWZ9	349	RUVB_DEHSC Holliday junction ATP-dependent DN...	182	0.012	42.4	25	41
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
702	A5FRK7	349	RUVB_DEHSB Holliday junction ATP-dependent DN...	182	0.012	42.4	25	41
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
703	B2T404	423	CLPX_BURPP ATP-dependent Clp protease ATP-bin...	103	0.15	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
704	Q13Z14	423	CLPX_BURXL ATP-dependent Clp protease ATP-bin...	103	0.15	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
705	A9AJR1	423	CLPX_BURM1 ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
706	Q9V2G3	479	RFCL_PYRAB Replication factor C large subunit...	131	0.047	40.8	29	40
									GO:0005524; F:ATP binding; IEA:HAMAP.::GO:0003689; F:DNA clamp loader activity; IEA:HAMAP.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:HAMAP.
707	B2JGL6	423	CLPX_BURP8 ATP-dependent Clp protease ATP-bin...	103	0.16	38.9	30	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
708	Q2NTI8	338	RUVB_SODGM Holliday junction ATP-dependent DN...	103	0.22	38.1	33	48
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
709	A7HJD6	347	RUVB_FERNB Holliday junction ATP-dependent DN...	74	1.4	35.8	34	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
710	Q7VXI6	434	CLPX_BORPE ATP-dependent Clp protease ATP-bin...	103	0.082	40	31	48
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
711	Q048Y7	336	RUVB_LACDB Holliday junction ATP-dependent DN...	71	0.007	43.1	38	59
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
712	Q1G941	336	RUVB_LACDA Holliday junction ATP-dependent DN...	71	0.007	43.1	38	59
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
713	Q180E8	416	CLPX_CLOD6 ATP-dependent Clp protease ATP-bin...	103	3.1	34.7	29	46
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
714	Q7W8X1	434	CLPX_BORPA ATP-dependent Clp protease ATP-bin...	103	0.091	39.7	31	48
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
715	Q7WK82	434	CLPX_BORBR ATP-dependent Clp protease ATP-bin...	103	0.091	39.7	31	48
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
716	Q65RF7	412	CLPX_MANSM ATP-dependent Clp protease ATP-bin...	103	0.92	36.6	29	46
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
717	Q9A3G8	346	RUVB_CAUCR Holliday junction ATP-dependent DN...	176	0.29	37.7	30	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
718	B8H454	346	RUVB_CAUCN Holliday junction ATP-dependent DN...	176	0.29	37.7	30	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
719	Q2L255	432	CLPX_BORA1 ATP-dependent Clp protease ATP-bin...	103	0.077	40	31	48
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006457; P:protein folding; IEA:InterPro.
720	Q839T5	338	RUVB_ENTFA Holliday junction ATP-dependent DN...	33	0.5	37	48	55
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
721	O53687	631	ECCA3_MYCTU ESX-3 secretion system protein Ec...	171	0.0008	46.6	27	45	GO:0005618; C:cell wall; IDA:MTBBASE.::GO:0005829; C:cytosol; IDA:MTBBASE.::GO:0005886; C:plasma membrane; IDA:MTBBASE.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0010106; P:cellular response to iron ion starvation; IEP:MTBBASE.::GO:0040007; P:growth; IMP:MTBBASE.::GO:0033214; P:iron assimilation by chelation and transport; IMP:MTBBASE.::GO:0055069; P:zinc ion homeostasis; IDA:MTBBASE.

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