Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR397C
Length:
780
Number of sequences:
5887
Description:
YLR397C AFG2 SGDID:S000004389, Chr XII from 914892-912550, Genome Release 64-1-1, reverse complement, Verified ORF, "ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; is essential for pre-60S maturation and release of several preribosome maturation factors; may be involved in degradation of aberrant mRNAs"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
601Q5XHZ9    432   PCH2_RAT Pachytene checkpoint protein 2 homol...1640.000000006     62.4     29     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0007131; P:reciprocal meiotic recombination; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.
602E1C6Q1    432   PCH2_CHICK Pachytene checkpoint protein 2 hom...1640.00000002     61.2     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0007131; P:reciprocal meiotic recombination; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.
603Q6PH52    424   PCH2_DANRE Pachytene checkpoint protein 2 hom...2190.0000000001     67.8     26     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007131; P:reciprocal meiotic recombination; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.
604E2R222    432   PCH2_CANFA Pachytene checkpoint protein 2 hom...1640.00000002     61.2     29     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007131; P:reciprocal meiotic recombination; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.
605Q859W7    2392   YCF2_ANTFO Protein ycf2 OS=Anthoceros formosa...2420.00000000002     71.6     26     46GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
606D3K5L7    431   PCH2_PIG Pachytene checkpoint protein 2 homol...1640.00000008     58.9     29     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007131; P:reciprocal meiotic recombination; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.
607P32839    456   BCS1_YEAST Mitochondrial chaperone BCS1 OS=Sa...1460.0000000002     67.4     29     49GO:0005829; C:cytosol; TAS:Reactome.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IDA:SGD.::GO:0005758; C:mitochondrial intermembrane space; TAS:Reactome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008320; F:protein transmembrane transporter activity; IMP:SGD.
GO:0051131; P:chaperone-mediated protein complex assembly; IPI:SGD.::GO:0034551; P:mitochondrial respiratory chain complex III assembly; IMP:SGD.::GO:0032979; P:protein insertion into mitochondrial membrane from inner side; IMP:SGD.
608Q0P3N5    1260   YCX1_OSTTA Uncharacterized protein OtCpg00170...2010.0000000002     68.6     25     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.
609Q9P6Q3    449   BCS1_SCHPO Probable mitochondrial chaperone b...1510.0000000003     67     30     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042623; F:ATPase activity, coupled; ISS:PomBase.
GO:0043623; P:cellular protein complex assembly; ISS:PomBase.::GO:0016226; P:iron-sulfur cluster assembly; ISS:PomBase.
610Q7ZV60    420   BCS1_DANRE Mitochondrial chaperone BCS1 OS=Da...1510.000003     54.3     28     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
611Q7ZTL7    419   BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xe...1890.00000009     58.9     28     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
612A2T308    2381   YCF2_ANGEV Protein ycf2 OS=Angiopteris evecta...2620.00000004     60.8     24     42GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
613Q3V4U3    529   Y529_ATV Uncharacterized protein ORF529 OS=Ac...1300.000002     54.7     30     50GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
614Q9Y276    419   BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Ho...1680.00006     50.1     24     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005750; C:mitochondrial respiratory chain complex III; TAS:ProtInc.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0032981; P:mitochondrial respiratory chain complex I assembly; IMP:UniProtKB.::GO:0034551; P:mitochondrial respiratory chain complex III assembly; IMP:UniProtKB.::GO:0033617; P:mitochondrial respiratory chain complex IV assembly; IMP:UniProtKB.
615Q5E9H5    419   BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bo...1680.00008     49.7     24     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
616Q9CZP5    418   BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mu...1880.0002     47.8     23     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
617Q54HY8    421   BCS1A_DICDI Probable mitochondrial chaperone ...1660.00001     52.4     28     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:dictyBase.
GO:0051131; P:chaperone-mediated protein complex assembly; ISS:dictyBase.
618P38126    564   PCH2_YEAST Pachytene checkpoint protein 2 OS=...1770.0000002     58.2     27     45GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0040020; P:regulation of meiosis; TAS:SGD.
619Q6NVR9    594   ATAD3_XENTR ATPase family AAA domain-containi...1610.000003     54.7     27     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
620Q58E76    593   ATD3A_XENLA ATPase family AAA domain-containi...1610.000003     54.3     27     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
621Q925I1    591   ATAD3_MOUSE ATPase family AAA domain-containi...1610.0000005     57     27     50GO:0005743; C:mitochondrial inner membrane; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
622Q6AXQ7    822   IQCAL_RAT IQ and AAA domain-containing protei...1830.01     43.1     21     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
623Q5T9A4    648   ATD3B_HUMAN ATPase family AAA domain-containi...1510.0000008     56.2     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
624Q6PAX2    593   ATD3B_XENLA ATPase family AAA domain-containi...1610.000002     55.1     27     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
625Q54DY9    458   BCS1B_DICDI Probable mitochondrial chaperone ...1790.0000004     57     26     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:dictyBase.
GO:0051131; P:chaperone-mediated protein complex assembly; ISS:dictyBase.
626P61243    2259   YCF2_PHYPA Protein ycf2 OS=Physcomitrella pat...2260.00001     53.1     26     44GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
627Q09535    424   PCH2_CAEEL Putative pachytene checkpoint prot...1660.00004     50.4     27     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007126; P:meiosis; IMP:WormBase.
628Q3KRE0    591   ATAD3_RAT ATPase family AAA domain-containing...1950.000001     55.8     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
629A7YWC4    586   ATAD3_BOVIN ATPase family AAA domain-containi...1610.000001     55.5     27     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
630Q86XH1    822   IQCA1_HUMAN IQ and AAA domain-containing prot...1810.00003     51.2     23     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
631A6H690    825   IQCAL_MOUSE IQ and AAA domain-containing prot...1830.003     44.7     21     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
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