Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR384C
Length:
1349
Number of sequences:
5887
Description:
YLR384C IKI3 SGDID:S000004376, Chr XII from 892900-888851, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; maintains structural integrity of Elongator; homolog of human IKAP, mutations in which cause familial dysautonomia (FD)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q06706    1349   ELP1_YEAST Elongator complex protein 1 OS=Sac...13490     2789     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0033588; C:Elongator holoenzyme complex; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
2O59704    1253   ELP1_SCHPO Elongator complex protein 1 OS=Sch...13170     792     38     55GO:0005829; C:cytosol; IDA:PomBase.::GO:0033588; C:Elongator holoenzyme complex; ISS:PomBase.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006400; P:tRNA modification; ISS:PomBase.
3Q2TAQ1    1170   ELP1_XENLA Putative elongator complex protein...11919e-123     417     29     47GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4O95163    1332   ELP1_HUMAN Elongator complex protein 1 OS=Hom...3802e-49     196     35     48GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IDA:HGNC.::GO:0005730; C:nucleolus; IDA:HGNC.::GO:0008023; C:transcription elongation factor complex; IDA:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; TAS:ProtInc.
GO:0006955; P:immune response; TAS:ProtInc.::GO:0006461; P:protein complex assembly; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:HGNC.
5Q7TT37    1333   ELP1_MOUSE Elongator complex protein 1 OS=Mus...4154e-47     189     32     45GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
6Q8VHU4    1331   ELP1_RAT Elongator complex protein 1 OS=Rattu...4153e-44     179     31     44GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IDA:RGD.::GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.::GO:0004672; F:protein kinase activity; IDA:RGD.
GO:0007252; P:I-kappaB phosphorylation; IDA:RGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
7Q8WND5    1333   ELP1_RABIT Elongator complex protein 1 OS=Ory...4161e-49     197     33     47GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q9VGK7    1252   ELP1_DROME Putative elongator complex protein...3361e-30     135     29     49GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0016246; P:RNA interference; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q9FNA4    1319   ELP1_ARATH Elongator complex protein 1 OS=Ara...2581e-26     122     34     53GO:0005829; C:cytosol; IDA:TAIR.::GO:0033588; C:Elongator holoenzyme complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016746; F:transferase activity, transferring acyl groups; IEA:UniProtKB-KW.
GO:0080178; P:5-carbamoylmethyluridine metabolic process; IMP:TAIR.::GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009734; P:auxin mediated signaling pathway; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; IMP:TAIR.::GO:0048530; P:fruit morphogenesis; IMP:TAIR.::GO:0009965; P:leaf morphogenesis; IMP:TAIR.::GO:0031538; P:negative regulation of anthocyanin metabolic process; IMP:UniProtKB.::GO:0035265; P:organ growth; IMP:TAIR.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0009787; P:regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0010928; P:regulation of auxin mediated signaling pathway; IMP:UniProtKB.::GO:2000024; P:regulation of leaf development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006979; P:response to oxidative stress; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006400; P:tRNA modification; IMP:TAIR.
10Q8NEZ3    1342   WDR19_HUMAN WD repeat-containing protein 19 O...1150.047     42     30     50GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.::GO:0031514; C:motile cilium; ISS:UniProtKB.::GO:0032391; C:photoreceptor connecting cilium; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
11Q3UGF1    1341   WDR19_MOUSE WD repeat-containing protein 19 O...1150.26     39.7     30     48GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.::GO:0031514; C:motile cilium; IDA:UniProtKB.::GO:0032391; C:photoreceptor connecting cilium; IDA:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
12O42668    1039   TPR1_SCHPO Tetratricopeptide repeat protein 1...960.53     38.5     31     51GO:0016593; C:Cdc73/Paf1 complex; ISS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0006813; P:potassium ion transport; IMP:PomBase.::GO:0038032; P:termination of G-protein coupled receptor signaling pathway; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
13Q1IIS2    312   FMT_KORVE Methionyl-tRNA formyltransferase OS...1242.4     35.8     27     44
GO:0004479; F:methionyl-tRNA formyltransferase activity; IEA:EC.::GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
14Q7PS24    341   CIAO1_ANOGA Probable cytosolic iron-sulfur pr...1542.6     35.8     23     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
15B0XAF3    338   CIAO1_CULQU Probable cytosolic iron-sulfur pr...1302.8     35.4     25     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
16Q5DM57    1755   IF172_CHLRE Intraflagellar transport protein ...693.7     35.8     32     55GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0030992; C:intraflagellar transport particle B; IDA:BHF-UCL.::GO:0005932; C:microtubule basal body; IDA:MGI.::GO:0009434; C:microtubule-based flagellum; IDA:MGI.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
17Q9KWW7    673   FLID_TREMA Flagellar hook-associated protein ...2414.1     35.4     24     41GO:0055040; C:periplasmic flagellum; IEA:UniProtKB-SubCell.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009296; P:flagellum assembly; IEA:InterPro.
18Q13459    2157   MYO9B_HUMAN Unconventional myosin-IXb OS=Homo...1074.8     35.4     29     47GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0031941; C:filamentous actin; IDA:UniProtKB.::GO:0016459; C:myosin complex; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
GO:0003779; F:actin binding; IDA:UniProtKB.::GO:0043531; F:ADP binding; IDA:UniProtKB.::GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0016887; F:ATPase activity; IDA:UniProtKB.::GO:0005516; F:calmodulin binding; IDA:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000146; F:microfilament motor activity; IDA:UniProtKB.::GO:0005100; F:Rho GTPase activator activity; IDA:UniProtKB.
GO:0030048; P:actin filament-based movement; TAS:UniProtKB.::GO:0007266; P:Rho protein signal transduction; IC:UniProtKB.
19A6TQL2    467   SELA_ALKMQ L-seryl-tRNA(Sec) selenium transfe...1095.2     35     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004125; F:L-seryl-tRNASec selenium transferase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
20Q22830    1737   OSM1_CAEEL Intraflagellar transport protein o...1188.2     34.7     25     46GO:0031513; C:nonmotile primary cilium; IDA:WormBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0035058; P:nonmotile primary cilium assembly; IMP:WormBase.
21Q8U483    459   ARLY_PYRFU Argininosuccinate lyase OS=Pyrococ...1449.9     33.9     29     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004056; F:argininosuccinate lyase activity; IEA:EC.
GO:0042450; P:arginine biosynthetic process via ornithine; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 21 1 - 21
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::