Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR363C
Length:
218
Number of sequences:
5887
Description:
YLR363C NMD4 SGDID:S000004355, Chr XII from 853151-852495, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein interacting with Nam7p, may be involved in the nonsense-mediated mRNA decay pathway"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12129    218   NMD4_YEAST Nonsense-mediated decay protein 4 ...2188e-161     450     100     100GO:0005737; C:cytoplasm; IDA:SGD.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IPI:SGD.
2Q6FT66    244   NMD4_CANGA Nonsense-mediated decay protein 4 ...2443e-90     272     54     74GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.
3Q6CVZ8    244   NMD4_KLULA Nonsense-mediated decay protein 4 ...2363e-46     159     37     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.
4Q6BJE2    416   NMD4_DEBHA Nonsense-mediated decay protein 4 ...268.1     31.2     46     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.
5Q5AM50    398   NMD4_CANAL Nonsense-mediated decay protein 4 ...1080.0003     44.7     28     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.
6Q89AB3    1180   EX5B_BUCBP Exodeoxyribonuclease V beta chain ...761.4     33.5     33     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0008854; F:exodeoxyribonuclease V activity; IEA:EC.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
7Q3K888    336   ASTE_PSEPF Succinylglutamate desuccinylase OS...954.7     31.6     24     51
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0009017; F:succinylglutamate desuccinylase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0019544; P:arginine catabolic process to glutamate; IEA:InterPro.
8Q3UMR0    1048   ANR27_MOUSE Ankyrin repeat domain-containing ...536.5     31.6     30     53
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
9A4QJC4    485   ACCD_AETCO Acetyl-coenzyme A carboxylase carb...757.5     31.2     35     52GO:0009317; C:acetyl-CoA carboxylase complex; IEA:InterPro.::GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0003989; F:acetyl-CoA carboxylase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.
records
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