Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR340W
Length:
312
Number of sequences:
5887
Description:
YLR340W RPP0 SGDID:S000004332, Chr XII from 805887-806825, Genome Release 64-1-1, Verified ORF, "Conserved ribosomal protein P0 of the ribosomal stalk, which is involved in interaction between translational elongation factors and the ribosome; similar to rat P0, human P0, and E. coli L10e; phosphorylated on serine 302"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P05317    312   RLA0_YEAST 60S acidic ribosomal protein P0 OS...3120     630     100     100GO:0030686; C:90S preribosome; IDA:SGD.::GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
GO:0070180; F:LSU rRNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.::GO:0006414; P:translational elongation; IEA:InterPro.
2Q96TJ5    313   RLA0_NEUCR 60S acidic ribosomal protein P0 OS...2693e-121     357     66     84GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
3Q9C3Z6    314   RLA0_PODAS 60S acidic ribosomal protein P0 OS...2671e-120     356     68     84GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
4O74864    312   RLA0_SCHPO 60S acidic ribosomal protein P0 OS...3086e-118     349     59     76GO:0022626; C:cytosolic ribosome; NAS:PomBase.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0002182; P:cytoplasmic translational elongation; NAS:PomBase.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
5Q9DG68    315   RLA0_RANSY 60S acidic ribosomal protein P0 OS...3062e-102     310     54     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
6Q93572    312   RLA0_CAEEL 60S acidic ribosomal protein P0 OS...3051e-101     307     54     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
7Q9PV90    319   RLA0_DANRE 60S acidic ribosomal protein P0 OS...3101e-100     305     54     72GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0009790; P:embryo development; IMP:ZFIN.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
8Q9U3U0    317   RLA0_CERCA 60S acidic ribosomal protein P0 OS...3081e-99     302     50     69GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
9P05388    317   RLA0_HUMAN 60S acidic ribosomal protein P0 OS...3081e-98     300     54     74GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
10Q95140    318   RLA0_BOVIN 60S acidic ribosomal protein P0 OS...3094e-98     298     54     73GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
11Q29214    318   RLA0_PIG 60S acidic ribosomal protein P0 OS=S...3096e-98     298     54     73GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
12P47826    316   RLA0_CHICK 60S acidic ribosomal protein P0 OS...3078e-98     298     56     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
13P14869    317   RLA0_MOUSE 60S acidic ribosomal protein P0 OS...3086e-97     295     55     75GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
14P19889    317   RLA0_DROME 60S acidic ribosomal protein P0 OS...3082e-96     294     51     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IDA:FlyBase.
GO:0003906; F:DNA-(apurinic or apyrimidinic site) lyase activity; IEA:EC.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
15P19945    317   RLA0_RAT 60S acidic ribosomal protein P0 OS=R...2569e-96     292     55     77GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
16Q8NHW5    317   RLA0L_HUMAN 60S acidic ribosomal protein P0-l...3086e-95     290     53     73GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
17Q90YX1    317   RLA0_ICTPU 60S acidic ribosomal protein P0 OS...2664e-94     288     53     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
18O04204    317   RLA01_ARATH 60S acidic ribosomal protein P0-1...3086e-91     280     47     66GO:0022626; C:cytosolic ribosome; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
19P41095    319   RLA0_ORYSJ 60S acidic ribosomal protein P0 OS...3112e-86     269     46     67
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
20P50346    320   RLA0_SOYBN 60S acidic ribosomal protein P0 OS...3122e-86     269     48     66GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
21Q42112    320   RLA02_ARATH 60S acidic ribosomal protein P0-2...2701e-83     261     46     67GO:0009507; C:chloroplast; IDA:TAIR.::GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0005507; F:copper ion binding; IDA:TAIR.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009409; P:response to cold; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0010043; P:response to zinc ion; IEP:TAIR.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
22P57691    323   RLA03_ARATH 60S acidic ribosomal protein P0-3...2706e-83     260     46     67GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
23O24573    319   RLA0_MAIZE 60S acidic ribosomal protein P0 OS...3109e-80     251     46     67
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
24Q94660    316   RLA0_PLAF8 60S acidic ribosomal protein P0 OS...3113e-73     234     42     65GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
25P50345    322   RLA0_LUPLU 60S acidic ribosomal protein P0 OS...3134e-73     234     45     63GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
26P22685    305   RLA0_DICDI 60S acidic ribosomal protein P0 OS...3118e-67     218     41     59GO:0045335; C:phagocytic vesicle; IDA:dictyBase.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:dictyBase.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
27P29764    321   RLA0_CHERU 60S acidic ribosomal protein P0 OS...3212e-66     217     42     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
28Q967Y7    314   RLA0_EIMTE 60S acidic ribosomal protein P0 OS...3071e-61     204     42     65GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
29P26796    323   RLA0_TRYCR 60S acidic ribosomal protein P0 OS...2703e-61     204     40     60GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
30Q8SRJ7    290   RLA0_ENCCU 60S acidic ribosomal protein P0 OS...2572e-60     200     40     63GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
31P39096    322   RLA0_LEICH 60S acidic ribosomal protein P0 OS...2705e-60     200     41     61GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
records
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