Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR340W
Length:
312
Number of sequences:
5887
Description:
YLR340W RPP0 SGDID:S000004332, Chr XII from 805887-806825, Genome Release 64-1-1, Verified ORF, "Conserved ribosomal protein P0 of the ribosomal stalk, which is involved in interaction between translational elongation factors and the ribosome; similar to rat P0, human P0, and E. coli L10e; phosphorylated on serine 302"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61C6A1F5    338   RLA0_THESM Acidic ribosomal protein P0 homolo...2585e-23     100     29     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
62Q971J2    334   RLA0_SULTO Acidic ribosomal protein P0 homolo...2332e-22     99     28     50GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
63P54049    338   RLA0_METJA Acidic ribosomal protein P0 homolo...2265e-22     97.8     27     52GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
64P35023    335   RLA0_SULAC Acidic ribosomal protein P0 homolo...2532e-20     92.8     26     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
65P96039    338   RLA0_SULSO Acidic ribosomal protein P0 homolo...2554e-20     92     28     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
66P57692    314   RLA0_THEAC Acidic ribosomal protein P0 homolo...2274e-20     92     26     51GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
67C3MZC0    338   RLA0_SULIA Acidic ribosomal protein P0 homolo...2551e-18     87.8     27     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
68C3MXH4    338   RLA0_SULIM Acidic ribosomal protein P0 homolo...2843e-18     87     28     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
69C4KIJ9    338   RLA0_SULIK Acidic ribosomal protein P0 homolo...2843e-18     87     28     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
70C3N7E1    338   RLA0_SULIY Acidic ribosomal protein P0 homolo...2581e-17     85.5     28     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
71C3NG93    338   RLA0_SULIN Acidic ribosomal protein P0 homolo...2581e-17     85.5     28     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
72C3MR85    338   RLA0_SULIL Acidic ribosomal protein P0 homolo...2581e-17     85.5     28     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
73Q8ZTT3    345   RLA0_PYRAE Acidic ribosomal protein P0 homolo...2302e-17     84.7     30     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
74A3DNI2    338   RLA0_STAMF Acidic ribosomal protein P0 homolo...2642e-16     81.6     25     45GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
75Q97BN3    314   RLA0_THEVO Acidic ribosomal protein P0 homolo...2300.000000000000002     79     26     50GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
76A8ABQ7    346   RLA0_IGNH4 Acidic ribosomal protein P0 homolo...2610.000000000000006     77.4     27     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
77O28781    339   RLA0_ARCFU Acidic ribosomal protein P0 homolo...2390.00000000000001     76.6     27     46GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
78Q7S302    252   MRT4_NEUCR mRNA turnover protein 4 homolog OS...2080.00000000000005     73.6     27     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
79Q86HD3    223   MRT4_DICDI mRNA turnover protein 4 homolog OS...1850.000000000002     68.6     26     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
80Q9UKD2    239   MRT4_HUMAN mRNA turnover protein 4 homolog OS...1980.00000000007     64.7     25     46GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
81Q6FJ04    239   MRT4_CANGA mRNA turnover protein 4 homolog OS...2120.0000000004     62.4     25     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
82P33201    236   MRT4_YEAST mRNA turnover protein 4 OS=Sacchar...2140.000000003     59.7     27     45GO:0005730; C:nucleolus; IDA:SGD.::GO:0005654; C:nucleoplasm; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0000956; P:nuclear-transcribed mRNA catabolic process; IMP:SGD.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.
83Q9D0I8    239   MRT4_MOUSE mRNA turnover protein 4 homolog OS...1970.000000003     60.1     23     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
84A4FV84    239   MRT4_BOVIN mRNA turnover protein 4 homolog OS...1970.000000003     60.1     23     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
85Q2JM49    187   RL10_SYNJB 50S ribosomal protein L10 OS=Yello...1670.000003     50.4     26     46GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
86Q2JTQ3    187   RL10_SYNJA 50S ribosomal protein L10 OS=Yello...1670.000003     50.1     26     46GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
87Q75DK9    236   MRT4_ASHGO mRNA turnover protein 4 homolog OS...2070.00001     48.9     22     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
88Q9Y9W8    341   RLA0_AERPE Acidic ribosomal protein P0 homolo...2310.00007     47.4     23     40GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
89Q7U3T8    175   RL10_SYNPX 50S ribosomal protein L10 OS=Synec...920.00008     45.8     35     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
90B1X074    188   RL10_CYAA5 50S ribosomal protein L10 OS=Cyano...920.0002     45.1     33     52GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
91O80362    227   RK10_TOBAC 50S ribosomal protein L10, chlorop...860.001     43.1     30     52GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
records
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