Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR335W
Length:
720
Number of sequences:
5887
Description:
YLR335W NUP2 SGDID:S000004327, Chr XII from 797430-799592, Genome Release 64-1-1, Verified ORF, "Nucleoporin involved in nucleocytoplasmic transport, binds to either the nucleoplasmic or cytoplasmic faces of the nuclear pore complex depending on Ran-GTP levels; also has a role in chromatin organization"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P32499    720   NUP2_YEAST Nucleoporin NUP2 OS=Saccharomyces ...7200     1415     100     100GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000790; C:nuclear chromatin; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0006609; P:mRNA-binding (hnRNP) protein import into nucleus; TAS:SGD.::GO:0006607; P:NLS-bearing substrate import into nucleus; TAS:SGD.::GO:0006999; P:nuclear pore organization; TAS:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0006611; P:protein export from nucleus; TAS:SGD.::GO:0006612; P:protein targeting to membrane; IMP:SGD.::GO:0006610; P:ribosomal protein import into nucleus; TAS:SGD.::GO:0006407; P:rRNA export from nucleus; TAS:SGD.::GO:0006408; P:snRNA export from nucleus; TAS:SGD.::GO:0006608; P:snRNP protein import into nucleus; TAS:SGD.::GO:0006409; P:tRNA export from nucleus; TAS:SGD.
2P14907    823   NSP1_YEAST Nucleoporin NSP1 OS=Saccharomyces ...1912     35.4     30     41GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005543; F:phospholipid binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0097064; P:ncRNA export from nucleus; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
3P49792    3224   RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=H...1810.0000002     58.2     25     46GO:0005829; C:cytosol; TAS:Reactome.::GO:0005643; C:nuclear pore; IDA:UniProtKB.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0008536; F:Ran GTPase binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0006606; P:protein import into nucleus; TAS:ProtInc.::GO:0016925; P:protein sumoylation; IDA:UniProtKB.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
4Q9USL4    565   NUP61_SCHPO Nucleoporin nup61 OS=Schizosaccha...3910.0000000000001     77.8     30     46GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; TAS:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
5P48820    1085   RBP2_BOVIN E3 SUMO-protein ligase RanBP2 OS=B...2050.0000003     57.8     24     45GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
6Q9ERU9    3053   RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=M...1970.00000009     59.7     26     47GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
7P40517    327   YRB2_YEAST Ran-specific GTPase-activating pro...2560.000000000006     70.9     30     45GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0006611; P:protein export from nucleus; IMP:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.
8P41920    201   YRB1_YEAST Ran-specific GTPase-activating pro...1820.0000000005     63.5     30     48GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0008536; F:Ran GTPase binding; IDA:SGD.
GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0006405; P:RNA export from nucleus; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
9Q99666    1765   RGPD5_HUMAN RANBP2-like and GRIP domain-conta...1220.00001     52.8     25     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
10O14715    1765   RGPD8_HUMAN RANBP2-like and GRIP domain-conta...1220.00001     52.8     25     52GO:0005643; C:nuclear pore; NAS:UniProtKB.
GO:0008536; F:Ran GTPase binding; NAS:UniProtKB.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
11P20676    1076   NUP1_YEAST Nucleoporin NUP1 OS=Saccharomyces ...3440.92     36.6     30     42GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006607; P:NLS-bearing substrate import into nucleus; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000972; P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.
12A6NKT7    1758   RGPD3_HUMAN RanBP2-like and GRIP domain-conta...1220.000009     53.1     25     50
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
13P0DJD1    1756   RGPD2_HUMAN RANBP2-like and GRIP domain-conta...1810.000004     54.3     24     45
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
14P0DJD0    1748   RGPD1_HUMAN RANBP2-like and GRIP domain-conta...1810.000002     55.5     24     46
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
15Q7Z3J3    1758   RGPD4_HUMAN RanBP2-like and GRIP domain-conta...2050.0000002     58.5     26     47
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
16P92985    219   RBP1C_ARATH Ran-binding protein 1 homolog c O...1180.00006     48.5     26     47GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000060; P:protein import into nucleus, translocation; TAS:TAIR.
17P43487    201   RANG_HUMAN Ran-specific GTPase-activating pro...1230.00007     47.8     33     48GO:0005635; C:nuclear envelope; TAS:Reactome.
GO:0005092; F:GDP-dissociation inhibitor activity; TAS:ProtInc.::GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0008536; F:Ran GTPase binding; TAS:ProtInc.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0007165; P:signal transduction; TAS:UniProtKB.::GO:0016032; P:viral reproduction; TAS:Reactome.
18P34022    203   RANG_MOUSE Ran-specific GTPase-activating pro...1230.00008     47.8     33     48GO:0005813; C:centrosome; IDA:MGI.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0046604; P:positive regulation of mitotic centrosome separation; IDA:MGI.::GO:0007051; P:spindle organization; IDA:MGI.
19Q9LMK7    228   RBP1A_ARATH Ran-binding protein 1 homolog a O...1380.0002     47.4     26     43GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
20P49791    1468   NU153_RAT Nuclear pore complex protein Nup153...2560.0003     48.1     28     44GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008536; F:Ran GTPase binding; IPI:RGD.::GO:0008270; F:zinc ion binding; IDA:RGD.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
21Q3T0M7    206   RANG_BOVIN Ran-specific GTPase-activating pro...720.0005     45.4     36     53
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0046907; P:intracellular transport; IEA:InterPro.
22Q09146    399   HBA1_SCHPO Brefeldin A resistance protein OS=...1060.002     45.1     31     52GO:0005654; C:nucleoplasm; IDA:PomBase.
GO:0071238; P:cellular response to brefeldin A; IMP:PomBase.::GO:0071313; P:cellular response to caffeine; IMP:PomBase.::GO:0034599; P:cellular response to oxidative stress; IGI:PomBase.::GO:0006611; P:protein export from nucleus; IMP:PomBase.::GO:0000056; P:ribosomal small subunit export from nucleus; ISS:PomBase.
23Q09717    215   RANG_SCHPO Ran-specific GTPase-activating pro...800.003     43.5     33     48GO:0005829; C:cytosol; IDA:PomBase.
GO:0005525; F:GTP binding; TAS:PomBase.::GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0006606; P:protein import into nucleus; ISS:PomBase.::GO:0031291; P:Ran protein signal transduction; IGI:PomBase.::GO:0006405; P:RNA export from nucleus; ISS:PomBase.
24Q8RWG8    217   RBP1B_ARATH Ran-binding protein 1 homolog b O...1450.004     43.1     25     43GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
25Q54KD9    194   RANG_DICDI Ran-specific GTPase-activating pro...690.024     40.4     30     55GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0008536; F:Ran GTPase binding; ISS:dictyBase.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0031291; P:Ran protein signal transduction; ISS:dictyBase.
26Q8SSI6    219   YRB1_ENCCU Ran-specific GTPase-activating pro...1410.041     40     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
27Q6PDH4    491   RNB3L_MOUSE Ran-binding protein 3-like OS=Mus...1120.2     38.5     24     46
GO:0046907; P:intracellular transport; IEA:InterPro.
28Q86VV4    465   RNB3L_HUMAN Ran-binding protein 3-like OS=Hom...810.3     38.1     30     48
GO:0046907; P:intracellular transport; IEA:InterPro.
29Q5R4Y2    494   RANB3_PONAB Ran-binding protein 3 OS=Pongo ab...680.32     37.7     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
30Q9H6Z4    567   RANB3_HUMAN Ran-binding protein 3 OS=Homo sap...680.33     37.7     29     54GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0070412; F:R-SMAD binding; IPI:UniProtKB.::GO:0008536; F:Ran GTPase binding; TAS:ProtInc.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
31Q4R4T9    499   RANB3_MACFA Ran-binding protein 3 OS=Macaca f...680.35     37.7     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
records
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