Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR323C
Length:
259
Number of sequences:
5887
Description:
YLR323C CWC24 SGDID:S000004315, Chr XII from 778952-778173, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential protein, component of a complex containing Cef1p; has similarity to S. pombe Cwf24p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q7XU27    884   BRE1A_ORYSJ E3 ubiquitin-protein ligase BRE1-...410.3     36.2     34     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
212Q80X56    500   TRI69_MOUSE Tripartite motif-containing prote...550.31     35.8     38     47GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
213Q9Y577    477   TRI17_HUMAN E3 ubiquitin-protein ligase TRIM1...320.31     35.8     38     59GO:0005622; C:intracellular; IEA:InterPro.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.
214Q1MTQ0    692   BRL1_SCHPO E3 ubiquitin-protein ligase brl1 O...280.31     35.8     43     68GO:0005721; C:centromeric heterochromatin; IDA:PomBase.::GO:0033503; C:HULC complex; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006342; P:chromatin silencing; IMP:PomBase.::GO:0006336; P:DNA replication-independent nucleosome assembly; TAS:PomBase.::GO:0071894; P:histone H2B conserved C-terminal lysine ubiquitination; IDA:PomBase.::GO:0051569; P:regulation of histone H3-K4 methylation; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEP:PomBase.
215O74563    680   BRL2_SCHPO E3 ubiquitin-protein ligase brl2 O...410.31     35.8     37     61GO:0005721; C:centromeric heterochromatin; IDA:PomBase.::GO:0033503; C:HULC complex; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006336; P:DNA replication-independent nucleosome assembly; TAS:PomBase.::GO:0071894; P:histone H2B conserved C-terminal lysine ubiquitination; IDA:PomBase.::GO:0051569; P:regulation of histone H3-K4 methylation; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEP:PomBase.
216Q9FKA7    617   ORTH1_ARATH E3 ubiquitin-protein ligase ORTHR...270.43     35.4     44     56GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0008327; F:methyl-CpG binding; IDA:TAIR.::GO:0010428; F:methyl-CpNpG binding; IDA:TAIR.::GO:0010429; F:methyl-CpNpN binding; IDA:TAIR.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010424; P:DNA methylation on cytosine within a CG sequence; IMP:UniProtKB.::GO:0090309; P:positive regulation of methylation-dependent chromatin silencing; IMP:UniProtKB.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR.
217A6NDQ2    463   TRIX3_HUMAN Tripartite motif-containing prote...450.35     35.8     36     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
218Q8CJC5    254   NEUL3_MOUSE E3 ubiquitin-protein ligase NEURL...520.35     35.4     33     50
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
219Q8R0K2    507   TRI31_MOUSE E3 ubiquitin-protein ligase TRIM3...400.36     35.8     38     53GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
220Q5BK82    499   TRI69_RAT Tripartite motif-containing protein...520.38     35.4     33     46GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
221Q867B5    1043   RAG1_PIG V(D)J recombination-activating prote...400.4     35.8     38     53GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0004519; F:endonuclease activity; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0010390; P:histone monoubiquitination; ISS:UniProtKB.::GO:0002331; P:pre-B cell allelic exclusion; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0033077; P:T cell differentiation in thymus; ISS:UniProtKB.::GO:0033151; P:V(D)J recombination; ISS:UniProtKB.
222Q9SQU4    462   C3H34_ARATH Zinc finger CCCH domain-containin...911.1     34.3     22     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
223Q5TC82    1133   RC3H1_HUMAN Roquin OS=Homo sapiens (Human). G...380.42     35.8     37     63GO:0000932; C:cytoplasmic mRNA processing body; ISS:BHF-UCL.::GO:0010494; C:cytoplasmic stress granule; ISS:BHF-UCL.
GO:0003730; F:mRNA 3'-UTR binding; ISS:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; TAS:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033962; P:cytoplasmic mRNA processing body assembly; ISS:BHF-UCL.::GO:0046007; P:negative regulation of activated T cell proliferation; ISS:BHF-UCL.::GO:0030889; P:negative regulation of B cell proliferation; ISS:BHF-UCL.::GO:0002635; P:negative regulation of germinal center formation; ISS:BHF-UCL.::GO:0045623; P:negative regulation of T-helper cell differentiation; ISS:BHF-UCL.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; ISS:BHF-UCL.::GO:0043488; P:regulation of mRNA stability; ISS:BHF-UCL.::GO:0050856; P:regulation of T cell receptor signaling pathway; ISS:BHF-UCL.
224Q9ULX5    631   RN112_HUMAN RING finger protein 112 OS=Homo s...380.42     35.4     34     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005525; F:GTP binding; IEA:InterPro.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
225O77666    545   TRI26_PIG Tripartite motif-containing protein...240.42     35.4     46     67GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
226Q5C8T8    493   TRIM5_PONAB Tripartite motif-containing prote...330.42     35.4     39     55GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
227Q4VGL6    1130   RC3H1_MOUSE Roquin OS=Mus musculus (Mouse). G...380.43     35.8     37     63GO:0000932; C:cytoplasmic mRNA processing body; IDA:BHF-UCL.::GO:0010494; C:cytoplasmic stress granule; IDA:BHF-UCL.
GO:0003730; F:mRNA 3'-UTR binding; IDA:BHF-UCL.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033962; P:cytoplasmic mRNA processing body assembly; IMP:BHF-UCL.::GO:0046007; P:negative regulation of activated T cell proliferation; IMP:BHF-UCL.::GO:0030889; P:negative regulation of B cell proliferation; IMP:BHF-UCL.::GO:0002635; P:negative regulation of germinal center formation; IMP:BHF-UCL.::GO:0045623; P:negative regulation of T-helper cell differentiation; IMP:MGI.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IMP:BHF-UCL.::GO:0043488; P:regulation of mRNA stability; IMP:BHF-UCL.::GO:0050856; P:regulation of T cell receptor signaling pathway; IMP:BHF-UCL.
228Q2YEM9    493   TRIM5_PONPY Tripartite motif-containing prote...330.43     35.4     39     55GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
229Q8IYM9    498   TRI22_HUMAN E3 ubiquitin-protein ligase TRIM2...450.43     35.4     33     53GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006955; P:immune response; TAS:ProtInc.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0070206; P:protein trimerization; IDA:UniProtKB.::GO:0009615; P:response to virus; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
230Q9FVS2    660   ORTH3_ARATH E3 ubiquitin-protein ligase ORTHR...270.44     35.4     44     63GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0008327; F:methyl-CpG binding; ISS:UniProtKB.::GO:0010428; F:methyl-CpNpG binding; ISS:UniProtKB.::GO:0010429; F:methyl-CpNpN binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010424; P:DNA methylation on cytosine within a CG sequence; ISS:UniProtKB.
231Q2T9Z0    475   TRI17_BOVIN E3 ubiquitin-protein ligase TRIM1...320.44     35.4     38     56GO:0005622; C:intracellular; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
232Q6DJN2    556   TRF6B_XENLA TNF receptor-associated factor 6-...400.44     35.4     35     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007250; P:activation of NF-kappaB-inducing kinase activity; IDA:UniProtKB.::GO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
233Q338N2    702   C3H62_ORYSJ Zinc finger CCCH domain-containin...260.45     35.4     50     73
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
234Q336R3    844   BRE1B_ORYSJ E3 ubiquitin-protein ligase BRE1-...440.45     35.4     34     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
235A2ZAC2    844   BRE1B_ORYSI E3 ubiquitin-protein ligase BRE1-...440.45     35.4     34     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
236A0JN74    468   TRI11_BOVIN E3 ubiquitin-protein ligase TRIM1...380.45     35.4     32     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009615; P:response to virus; IEA:UniProtKB-KW.
237Q8VYZ0    645   ORTH2_ARATH E3 ubiquitin-protein ligase ORTHR...345.2     32     38     53GO:0010369; C:chromocenter; IDA:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:TAIR.::GO:0010385; F:double-stranded methylated DNA binding; IDA:TAIR.::GO:0042393; F:histone binding; IPI:UniProtKB.::GO:0008327; F:methyl-CpG binding; ISS:UniProtKB.::GO:0010428; F:methyl-CpNpG binding; ISS:UniProtKB.::GO:0010429; F:methyl-CpNpN binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IDA:TAIR.::GO:0031508; P:centromeric heterochromatin assembly; IMP:TAIR.::GO:0010424; P:DNA methylation on cytosine within a CG sequence; IMP:UniProtKB.::GO:0090309; P:positive regulation of methylation-dependent chromatin silencing; IMP:UniProtKB.
238Q84W91    468   C3H32_ARATH Zinc finger CCCH domain-containin...235.8     32     57     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
239Q7YR34    539   TRI26_PANTR Tripartite motif-containing prote...240.47     35.4     46     67
GO:0008270; F:zinc ion binding; IEA:InterPro.
240Q3ZEE5    493   TRIM5_HYLLA Tripartite motif-containing prote...650.47     35.4     28     45GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
241Q8L829    552   ARI5_ARATH Probable E3 ubiquitin-protein liga...610.47     35.4     34     49
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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