Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR321C
Length:
426
Number of sequences:
5887
Description:
YLR321C SFH1 SGDID:S000004313, Chr XII from 777864-776584, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the RSC chromatin remodeling complex; essential gene required for cell cycle progression and maintenance of proper ploidy; phosphorylated in the G1 phase of the cell cycle; Snf5p paralog"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q06168    426   SFH1_YEAST Chromatin structure-remodeling com...4260     884     100     100GO:0000228; C:nuclear chromosome; IEA:InterPro.::GO:0016586; C:RSC complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.::GO:0031055; P:chromatin remodeling at centromere; IMP:SGD.::GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IMP:UniProtKB.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0033262; P:regulation of DNA replication involved in S phase; IGI:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
2Q6FTV3    403   SFH1_CANGA Chromatin structure-remodeling com...4281e-115     351     46     64GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3Q754R8    383   SFH1_ASHGO Chromatin structure-remodeling com...4444e-112     341     46     62GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q6CSR7    442   SFH1_KLULA Chromatin structure-remodeling com...3164e-84     271     49     69GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q6C9N2    441   SFH1_YARLI Chromatin structure-remodeling com...2337e-50     180     39     63GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q9USM3    418   SFH1_SCHPO Chromatin structure-remodeling com...2266e-33     132     34     57GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043044; P:ATP-dependent chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q9Z0H3    385   SNF5_MOUSE SWI/SNF-related matrix-associated ...2121e-27     116     32     53GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB.::GO:0000228; C:nuclear chromosome; IEA:InterPro.::GO:0005625; C:soluble fraction; IDA:MGI.::GO:0016514; C:SWI/SNF complex; IDA:MGI.::GO:0001741; C:XY body; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0001835; P:blastocyst hatching; IMP:MGI.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IMP:MGI.::GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q12824    385   SNF5_HUMAN SWI/SNF-related matrix-associated ...2121e-27     116     32     53GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0000228; C:nuclear chromosome; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:ProtInc.::GO:0016514; C:SWI/SNF complex; IDA:UniProtKB.
GO:0002039; F:p53 binding; IPI:BHF-UCL.::GO:0030957; F:Tat protein binding; IPI:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IMP:BHF-UCL.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0015074; P:DNA integration; TAS:ProtInc.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0043923; P:positive regulation by host of viral transcription; IMP:BHF-UCL.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0045090; P:retroviral genome replication; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q5BIN2    385   SNF5_BOVIN SWI/SNF-related matrix-associated ...2121e-27     116     32     53GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q5ZK40    386   SNF5_CHICK SWI/SNF-related matrix-associated ...2121e-27     116     32     53GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q6DFM1    378   SNF5_XENTR SWI/SNF-related matrix-associated ...2123e-27     115     32     52GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q6GQ82    378   SNF5_XENLA SWI/SNF-related matrix-associated ...2054e-27     115     31     52GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q5U379    373   SNF5_DANRE SWI/SNF-related matrix-associated ...2094e-27     114     31     53GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14O42467    373   SNF5_TETFL SWI/SNF-related matrix-associated ...2121e-26     113     31     52GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15P93045    240   BSH_ARATH Chromatin structure-remodeling comp...690.00000006     56.6     46     62GO:0000228; C:nuclear chromosome; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16Q09699    632   SNF5_SCHPO SWI/SNF chromatin-remodeling compl...620.047     39.7     39     53GO:0005794; C:Golgi apparatus; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016514; C:SWI/SNF complex; IDA:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0010811; P:positive regulation of cell-substrate adhesion; IMP:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEP:PomBase.
17P18480    905   SNF5_YEAST SWI/SNF chromatin-remodeling compl...1890.00000004     59.3     28     43GO:0000228; C:nuclear chromosome; IEA:InterPro.::GO:0016514; C:SWI/SNF complex; IDA:SGD.
GO:0001102; F:RNA polymerase II activating transcription factor binding; IMP:SGD.
GO:0000436; P:carbon catabolite activation of transcription from RNA polymerase II promoter; IGI:SGD.::GO:0006338; P:chromatin remodeling; IMP:SGD.::GO:0000724; P:double-strand break repair via homologous recombination; IMP:SGD.::GO:0005987; P:sucrose catabolic process; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18P23087    438   HVCS_HETFR Ig heavy chain C region, secreted ...624.8     33.1     31     58
GO:0003823; F:antigen binding; IEA:UniProtKB-KW.
19P23088    461   HVCM_HETFR Ig heavy chain C region, membrane-...626.1     32.7     31     58GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003823; F:antigen binding; IEA:UniProtKB-KW.
20Q5JI74    629   GATE_PYRKO Glutamyl-tRNA(Gln) amidotransferas...837.5     32.7     25     51GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0004812; F:aminoacyl-tRNA ligase activity; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
21P45758    650   GSPD_ECOLI Putative type II secretion system ...1039.2     32.3     25     48GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.::GO:0015627; C:type II protein secretion system complex; IEA:InterPro.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0015628; P:protein secretion by the type II secretion system; IEA:InterPro.
records
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