rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q05900 | 231 | RU1C_YEAST U1 small nuclear ribonucleoprotein... | 231 | 3e-172 | 480 | 100 | 100 | GO:0000243; C:commitment complex; IPI:SGD.::GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; IPI:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD. | 2 | Q59P44 | 150 | RU1C_CANAL U1 small nuclear ribonucleoprotein... | 44 | 0.00000000000006 | 70.5 | 64 | 82 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 3 | C4YIU5 | 150 | RU1C_CANAW U1 small nuclear ribonucleoprotein... | 44 | 0.00000000000007 | 70.1 | 64 | 82 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 4 | D5GDH4 | 220 | RU1C_TUBMM U1 small nuclear ribonucleoprotein... | 51 | 0.00000000009 | 62.4 | 49 | 73 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 5 | Q4WQM6 | 216 | RU1C_ASPFU U1 small nuclear ribonucleoprotein... | 51 | 0.0000000002 | 61.6 | 47 | 73 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 6 | Q1K7T5 | 216 | RU1C_NEUCR U1 small nuclear ribonucleoprotein... | 51 | 0.0000000003 | 60.8 | 49 | 73 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 7 | Q5BBX9 | 236 | RU1C_EMENI U1 small nuclear ribonucleoprotein... | 51 | 0.0000000009 | 60.1 | 47 | 73 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 8 | C7YRT4 | 204 | RU1C_NECH7 U1 small nuclear ribonucleoprotein... | 51 | 0.000000001 | 58.9 | 49 | 73 | GO:0005685; C:U1 snRNP; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 9 | D3B3B7 | 141 | RU1C_POLPA U1 small nuclear ribonucleoprotein... | 39 | 0.000000002 | 57.8 | 59 | 72 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 10 | Q5KC16 | 220 | RU1C_CRYNJ U1 small nuclear ribonucleoprotein... | 52 | 0.00000001 | 56.6 | 42 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 11 | A8NYM5 | 209 | RU1C_COPC7 U1 small nuclear ribonucleoprotein... | 52 | 0.00000003 | 55.5 | 48 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 12 | Q8JGS0 | 159 | RU1C_DANRE U1 small nuclear ribonucleoprotein... | 52 | 0.00000004 | 54.3 | 44 | 67 | GO:0005685; C:U1 snRNP; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 13 | A7EYK3 | 181 | RU1C_SCLS1 U1 small nuclear ribonucleoprotein... | 46 | 0.00000005 | 54.3 | 52 | 72 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 14 | Q4P2Q5 | 221 | RU1C_USTMA U1 small nuclear ribonucleoprotein... | 48 | 0.00000006 | 55.1 | 44 | 71 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 15 | F7ARS3 | 138 | RU1C_MONDO U1 small nuclear ribonucleoprotein... | 52 | 0.00000008 | 53.1 | 44 | 67 | GO:0005685; C:U1 snRNP; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 16 | Q9P794 | 182 | RU1C_SCHPO U1 small nuclear ribonucleoprotein... | 57 | 0.00000009 | 53.9 | 42 | 60 | GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IC:PomBase. | 17 | E1C6F0 | 159 | RU1C_CHICK U1 small nuclear ribonucleoprotein... | 52 | 0.00000009 | 53.1 | 44 | 67 | | | | | | | | | | | | | | | | | | | | | | 18 | B0JYS7 | 159 | RU1C_XENTR U1 small nuclear ribonucleoprotein... | 52 | 0.0000001 | 53.1 | 44 | 67 | GO:0005685; C:U1 snRNP; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 19 | Q03369 | 159 | RU1C_XENLA U1 small nuclear ribonucleoprotein... | 52 | 0.0000001 | 53.1 | 44 | 67 | GO:0005685; C:U1 snRNP; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 20 | F6TFD9 | 159 | RU1C_MACMU U1 small nuclear ribonucleoprotein... | 52 | 0.0000001 | 53.1 | 44 | 67 | GO:0005685; C:U1 snRNP; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 21 | P09234 | 159 | RU1C_HUMAN U1 small nuclear ribonucleoprotein... | 52 | 0.0000001 | 53.1 | 44 | 67 | GO:0015030; C:Cajal body; IDA:UniProtKB.::GO:0005685; C:U1 snRNP; IDA:UniProtKB. | | | | | | | | | | GO:0042803; F:protein homodimerization activity; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IDA:UniProtKB. | | | | | | | | | | GO:0000387; P:spliceosomal snRNP assembly; IDA:UniProtKB. | 22 | E2RGI3 | 159 | RU1C_CANFA U1 small nuclear ribonucleoprotein... | 52 | 0.0000001 | 53.1 | 44 | 67 | GO:0005685; C:U1 snRNP; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 23 | Q32PA0 | 159 | RU1C_BOVIN U1 small nuclear ribonucleoprotein... | 52 | 0.0000001 | 53.1 | 44 | 67 | GO:0005685; C:U1 snRNP; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 24 | Q54YA5 | 174 | RU1C_DICDI U1 small nuclear ribonucleoprotein... | 40 | 0.0000001 | 53.1 | 55 | 68 | GO:0005685; C:U1 snRNP; ISS:dictyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008380; P:RNA splicing; ISS:dictyBase. | 25 | D3ZCL3 | 159 | RU1C_RAT U1 small nuclear ribonucleoprotein C... | 52 | 0.0000001 | 53.1 | 44 | 67 | | | | | | | | | | | | | | | | | | | | | | 26 | Q62241 | 159 | RU1C_MOUSE U1 small nuclear ribonucleoprotein... | 52 | 0.0000001 | 53.1 | 44 | 67 | | | | | | | | | | | | | | | | | | | | | | 27 | F6HQ26 | 213 | RU1C_VITVI U1 small nuclear ribonucleoprotein... | 77 | 0.0000002 | 53.5 | 34 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 28 | C0NN85 | 242 | RU1C_AJECG U1 small nuclear ribonucleoprotein... | 48 | 0.0000004 | 52.8 | 48 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 29 | E3KIY6 | 188 | RU1C2_PUCGT U1 small nuclear ribonucleoprotei... | 44 | 0.0000004 | 52 | 45 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 30 | E3LAN7 | 190 | RU1C1_PUCGT U1 small nuclear ribonucleoprotei... | 44 | 0.0000005 | 52 | 45 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | Q1RLC9 | 122 | RU1C_CIOIN U1 small nuclear ribonucleoprotein... | 52 | 0.0000005 | 50.8 | 42 | 67 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |