FGC: Single Locus Summary

UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YLR271W

Length:

274

Number of sequences:

5887

Description:

YLR271W YLR271W SGDID:S000004261, Chr XII from 682737-683561, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
61	Q9SK49	497	C3H22_ARATH Zinc finger CCCH domain-containin...	36	3.2	32.7	39	61
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.

62	P42698	387	DR111_ARATH DNA-damage-repair/toleration prot...	36	3.4	32.7	33	61	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:TAIR.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IGI:TAIR.
63	Q803R5	829	MTR1_DANRE Cap-specific mRNA (nucleoside-2'-O...	36	4.6	32.3	39	56	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
									GO:0006370; P:mRNA capping; ISS:UniProtKB.
64	A5ETJ3	910	MUTS_BRASB DNA mismatch repair protein MutS O...	62	4.7	32.3	31	48
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
									GO:0006298; P:mismatch repair; IEA:InterPro.
65	Q9Y103	839	TFP11_DROME Septin-interacting protein 1 OS=D...	72	5.6	32.3	25	47	GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
									GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
66	Q09806	301	YAB4_SCHPO Uncharacterized protein C2G11.04 O...	31	5.8	32	39	61	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
									GO:0003676; F:nucleic acid binding; IEA:InterPro.

67	Q6FP19	808	SQS1_CANGA Protein SQS1 OS=NRRL Y-65) (Yeast)...	48	7.8	31.6	29	52	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003676; F:nucleic acid binding; IEA:InterPro.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
68	Q7NM64	92	RS19_GLOVI 30S ribosomal protein S19 OS=Gloeo...	67	9.4	29.6	25	43	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.

records

‹‹

››

Total records:

61 - 68

Elimate unknown annotation:

Filter for keyword on hit description:

Select upper E value:

Select lower bit score:

Select lower %idenity value:

Select lower %positive value:

Taxonomic division:

Lower limit on hit length:

Lower limit on alignment length::