Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR247C
Length:
1556
Number of sequences:
5887
Description:
YLR247C IRC20 SGDID:S000004237, Chr XII from 633354-628684, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative helicase; localizes to the mitochondrion and the nucleus; YLR247C is not an essential gene; null mutant displays increased levels of spontaneous Rad52p foci"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
811Q2YEM9    493   TRIM5_PONPY Tripartite motif-containing prote...535.3     35     28     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
812Q5C8T8    493   TRIM5_PONAB Tripartite motif-containing prote...535.4     35     28     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
813Q5D7I5    494   TRIM5_CEBPY Tripartite motif-containing prote...535.4     35     30     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
814Q8SV35    314   Y733_ENCCU Uncharacterized RING finger protei...435.4     35     35     53
GO:0008270; F:zinc ion binding; IEA:InterPro.
815Q6NRE7    764   CBLBB_XENLA E3 ubiquitin-protein ligase CBL-B...405.5     35.4     35     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0001784; F:phosphotyrosine binding; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007166; P:cell surface receptor signaling pathway; IEA:InterPro.::GO:0023051; P:regulation of signaling; IEA:InterPro.
816Q9SLC3    236   ATL41_ARATH E3 ubiquitin-protein ligase ATL41...435.8     34.7     33     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
817Q9C035    493   TRIM5_HUMAN Tripartite motif-containing prote...535.8     35     28     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0042803; F:protein homodimerization activity; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0070206; P:protein trimerization; IDA:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
818Q1ACD8    493   TRIM5_PANPA Tripartite motif-containing prote...535.9     35     28     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
819Q5D7J1    493   TRIM5_PANTR Tripartite motif-containing prote...536     35     28     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
820B8B5U8    321   BAHL2_ORYSI Probable E3 ubiquitin-protein lig...626.1     34.7     34     52
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
821Q9LS99    220   ATL77_ARATH RING-H2 finger protein ATL77 OS=A...436.1     34.3     40     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
822A0JPQ4    477   TRI72_RAT Tripartite motif-containing protein...306.2     35     40     63GO:0030659; C:cytoplasmic vesicle membrane; ISS:UniProtKB.::GO:0042383; C:sarcolemma; ISS:UniProtKB.
GO:0001786; F:phosphatidylserine binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006887; P:exocytosis; IEA:UniProtKB-KW.::GO:0007517; P:muscle organ development; ISS:UniProtKB.::GO:0003012; P:muscle system process; ISS:UniProtKB.::GO:0001778; P:plasma membrane repair; ISS:UniProtKB.::GO:0051260; P:protein homooligomerization; ISS:UniProtKB.
823Q1XH17    477   TRI72_MOUSE Tripartite motif-containing prote...306.2     35     40     63GO:0030659; C:cytoplasmic vesicle membrane; IDA:UniProtKB.::GO:0042383; C:sarcolemma; IDA:UniProtKB.
GO:0001786; F:phosphatidylserine binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006887; P:exocytosis; TAS:UniProtKB.::GO:0006900; P:membrane budding; TAS:UniProtKB.::GO:0007517; P:muscle organ development; IMP:UniProtKB.::GO:0003012; P:muscle system process; IMP:UniProtKB.::GO:0001778; P:plasma membrane repair; IMP:UniProtKB.::GO:0051260; P:protein homooligomerization; IPI:UniProtKB.
824Q7XI73    321   BAHL2_ORYSJ Probable E3 ubiquitin-protein lig...626.2     34.7     34     52
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
825Q5C8T6    493   TRIM5_GORGO Tripartite motif-containing prote...536.4     35     28     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
826Q27YE2    101   Z_IPPYV RING finger protein Z OS=(IPPYV). GN=...586.4     32.7     31     47GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
827Q048Y3    537   CH60_LACDB 60 kDa chaperonin OS=Lactobacillus...1296.5     35     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0042026; P:protein refolding; IEA:InterPro.
828Q1G937    537   CH60_LACDA 60 kDa chaperonin OS=20081). GN=gr...1296.5     35     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0042026; P:protein refolding; IEA:InterPro.
829O19085    482   TRI10_PIG Tripartite motif-containing protein...486.6     35     33     46GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
830Q9TLX1    254   ABCX_CYACA Probable ATP-dependent transporter...1896.6     34.3     25     43GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
831Q6P9F5    258   TRI40_HUMAN Tripartite motif-containing prote...486.6     34.3     31     46GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
832Q66HG0    380   RNF13_RAT E3 ubiquitin-protein ligase RNF13 O...1206.9     34.7     24     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031902; C:late endosome membrane; ISS:UniProtKB.::GO:0005765; C:lysosomal membrane; ISS:UniProtKB.::GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.
833Q1L5Z9    754   LONF2_HUMAN LON peptidase N-terminal domain a...397.1     35     33     49
GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
834Q1QZ10    390   PNCB_CHRSD Nicotinate phosphoribosyltransfera...1507.3     34.7     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004516; F:nicotinate phosphoribosyltransferase activity; IEA:EC.::GO:0004514; F:nicotinate-nucleotide diphosphorylase (carboxylating) activity; IEA:InterPro.
GO:0009435; P:NAD biosynthetic process; IEA:InterPro.::GO:0019357; P:nicotinate nucleotide biosynthetic process; IEA:InterPro.
835Q96PM5    261   ZN363_HUMAN RING finger and CHY zinc finger d...687.4     34.3     25     49GO:0005737; C:cytoplasm; IDA:HGNC.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0002039; F:p53 binding; IPI:UniProtKB.::GO:0042803; F:protein homodimerization activity; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IDA:UniProtKB.
GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0031398; P:positive regulation of protein ubiquitination; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
836Q3TEL6    685   RN157_MOUSE RING finger protein 157 OS=Mus mu...517.8     34.7     33     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
837Q92265    419   PEX10_PICPA Peroxisome biogenesis factor 10 O...308     34.7     40     53GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
838A6NLI5    447   TR64C_HUMAN Putative tripartite motif-contain...798.6     34.3     29     44GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
839Q1XHT8    229   TRI40_PANTR Tripartite motif-containing prote...488.7     33.9     31     46GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
840Q1ZXR0    502   Y8444_DICDI TNF receptor-associated factor fa...569.9     34.3     39     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
records
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