Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR247C
Length:
1556
Number of sequences:
5887
Description:
YLR247C IRC20 SGDID:S000004237, Chr XII from 633354-628684, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative helicase; localizes to the mitochondrion and the nucleus; YLR247C is not an essential gene; null mutant displays increased levels of spontaneous Rad52p foci"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781Q9ET26    229   RN114_MOUSE RING finger protein 114 OS=Mus mu...443.2     35.4     36     52
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
782Q13191    982   CBLB_HUMAN E3 ubiquitin-protein ligase CBL-B ...723.2     36.2     31     42
783Q3TTA7    982   CBLB_MOUSE E3 ubiquitin-protein ligase CBL-B ...723.5     35.8     31     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0001784; F:phosphotyrosine binding; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007166; P:cell surface receptor signaling pathway; IEA:InterPro.::GO:0006955; P:immune response; IMP:MGI.::GO:0035556; P:intracellular signal transduction; IMP:MGI.::GO:0046642; P:negative regulation of alpha-beta T cell proliferation; IMP:MGI.::GO:0050860; P:negative regulation of T cell receptor signaling pathway; IMP:MGI.::GO:0045732; P:positive regulation of protein catabolic process; IMP:MGI.::GO:0002669; P:positive regulation of T cell anergy; IMP:MGI.::GO:0042110; P:T cell activation; IMP:MGI.
784Q7ZUL9    529   MGRN1_DANRE Probable E3 ubiquitin-protein lig...1433.8     35.8     21     40
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
785Q8K4S7    938   CBLB_RAT E3 ubiquitin-protein ligase CBL-B OS...723.9     35.8     31     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0045121; C:membrane raft; IDA:RGD.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0001784; F:phosphotyrosine binding; IEA:InterPro.::GO:0019901; F:protein kinase binding; IPI:RGD.::GO:0004871; F:signal transducer activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007166; P:cell surface receptor signaling pathway; IEA:InterPro.::GO:0023051; P:regulation of signaling; IEA:InterPro.::GO:0009629; P:response to gravity; IEP:RGD.::GO:0009725; P:response to hormone stimulus; IEP:RGD.
786Q9ULT6    936   ZNRF3_HUMAN Zinc/RING finger protein 3 OS=Hom...424     35.8     38     52GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
787Q9CWS1    417   RN135_MOUSE E3 ubiquitin-protein ligase RNF13...494.1     35.4     35     47GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0045088; P:regulation of innate immune response; ISS:UniProtKB.
788Q5C8U3    515   TRIM5_CERTA Tripartite motif-containing prote...544.1     35.4     28     50GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
789A6NI03    449   TR64B_HUMAN Putative tripartite motif-contain...554.1     35.4     36     45GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
790Q8TEJ3    882   SH3R3_HUMAN SH3 domain-containing RING finger...554.2     35.8     31     55
GO:0008270; F:zinc ion binding; IEA:InterPro.
791Q08109    551   HRD1_YEAST ERAD-associated E3 ubiquitin-prote...684.4     35.4     26     46GO:0000839; C:Hrd1p ubiquitin ligase ERAD-L complex; IDA:SGD.::GO:0000838; C:Hrd1p ubiquitin ligase ERAD-M complex; IDA:SGD.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030433; P:ER-associated protein catabolic process; IPI:SGD.::GO:0031505; P:fungal-type cell wall organization; IGI:SGD.
792Q5D7H8    494   TRIM5_CALDO Tripartite motif-containing prote...534.4     35.4     30     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
793Q5D7I9    495   TRIM5_PYGNE Tripartite motif-containing prote...544.4     35.4     28     50GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
794Q9BYJ4    488   TRI34_HUMAN Tripartite motif-containing prote...564.5     35.4     32     50GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070206; P:protein trimerization; IDA:UniProtKB.
795Q3UK78    256   PCGF5_MOUSE Polycomb group RING finger protei...444.6     35     34     55GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
796Q9LY41    334   ATL4_ARATH E3 ubiquitin-protein ligase ATL4 O...644.6     35     25     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
797Q6GQL0    918   CBLBA_XENLA E3 ubiquitin-protein ligase CBL-B...404.7     35.4     35     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0001784; F:phosphotyrosine binding; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007166; P:cell surface receptor signaling pathway; IEA:InterPro.::GO:0023051; P:regulation of signaling; IEA:InterPro.
798Q2NVX0    968   RAPA_SODGM RNA polymerase-associated protein ...624.7     35.4     32     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
799Q7XZZ3    339   BAHL1_ORYSJ Probable E3 ubiquitin-protein lig...624.8     35     27     44
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
800A2XK56    339   BAHL1_ORYSI Probable E3 ubiquitin-protein lig...624.8     35     27     44
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
801Q1ACD5    494   TRIM5_SAGOE Tripartite motif-containing prote...534.8     35.4     30     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
802Q9FNG6    378   C3H51_ARATH Zinc finger CCCH domain-containin...404.8     35     35     48GO:0016020; C:membrane; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
803Q19189    359   PEX12_CAEEL Putative peroxisome assembly prot...544.8     35     33     59GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006625; P:protein targeting to peroxisome; IEA:InterPro.
804Q4TU14    371   RHF1A_ARATH E3 ubiquitin-protein ligase RHF1A...424.8     35     33     50GO:0016020; C:membrane; IDA:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009561; P:megagametogenesis; IGI:TAIR.::GO:0055046; P:microgametogenesis; IGI:TAIR.::GO:0010498; P:proteasomal protein catabolic process; IDA:TAIR.::GO:0051726; P:regulation of cell cycle; IGI:TAIR.
805Q6DFR2    982   CBLB_XENTR E3 ubiquitin-protein ligase CBL-B ...404.9     35.4     35     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0001784; F:phosphotyrosine binding; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007166; P:cell surface receptor signaling pathway; IEA:InterPro.::GO:0023051; P:regulation of signaling; IEA:InterPro.
806Q5C8U1    494   TRIM5_SAGLB Tripartite motif-containing prote...535     35.4     30     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
807Q5D7H7    547   TRIM5_LAGLA Tripartite motif-containing prote...535     35.4     30     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
808Q86SE9    256   PCGF5_HUMAN Polycomb group RING finger protei...445.1     34.7     34     55GO:0005813; C:centrosome; IDA:LIFEdb.::GO:0031519; C:PcG protein complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
809Q5F3B2    244   RN166_CHICK RING finger protein 166 OS=Gallus...1015.2     34.7     30     45GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
810Q6K4V3    326   C3H15_ORYSJ Zinc finger CCCH domain-containin...405.3     35     35     48
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
811Q2YEM9    493   TRIM5_PONPY Tripartite motif-containing prote...535.3     35     28     51GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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