Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR247C
Length:
1556
Number of sequences:
5887
Description:
YLR247C IRC20 SGDID:S000004237, Chr XII from 633354-628684, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative helicase; localizes to the mitochondrion and the nucleus; YLR247C is not an essential gene; null mutant displays increased levels of spontaneous Rad52p foci"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541Q5NCP0    784   RNF43_MOUSE RING finger protein 43 OS=Mus mus...410.13     40.8     41     56GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005635; C:nuclear envelope; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
542O64762    302   ATL38_ARATH RING-H2 finger protein ATL38 OS=A...450.13     40     33     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
543Q5SWK7    663   RN145_MOUSE RING finger protein 145 OS=Mus mu...380.13     40.4     34     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
544Q9P2D1    2997   CHD7_HUMAN Chromodomain-helicase-DNA-binding ...650.13     40.8     31     49GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; TAS:BHF-UCL.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007417; P:central nervous system development; IMP:BHF-UCL.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0050890; P:cognition; IMP:BHF-UCL.::GO:0021545; P:cranial nerve development; IMP:BHF-UCL.::GO:0060324; P:face development; IMP:BHF-UCL.::GO:0048806; P:genitalia development; IMP:BHF-UCL.::GO:0003007; P:heart morphogenesis; IMP:BHF-UCL.::GO:0001701; P:in utero embryonic development; IMP:BHF-UCL.::GO:0042472; P:inner ear morphogenesis; IMP:BHF-UCL.::GO:0060173; P:limb development; IMP:BHF-UCL.::GO:0043584; P:nose development; IMP:BHF-UCL.::GO:0060021; P:palate development; IMP:BHF-UCL.::GO:0060123; P:regulation of growth hormone secretion; IMP:BHF-UCL.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:BHF-UCL.::GO:0060041; P:retina development in camera-type eye; IMP:BHF-UCL.::GO:0001501; P:skeletal system development; IMP:BHF-UCL.::GO:0030217; P:T cell differentiation; IMP:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
545Q5R9J5    336   RING2_PONAB E3 ubiquitin-protein ligase RING2...430.13     40     44     58GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0035102; C:PRC1 complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0016567; P:protein ubiquitination; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
546Q7YR34    539   TRI26_PANTR Tripartite motif-containing prote...450.13     40.4     44     58
GO:0008270; F:zinc ion binding; IEA:InterPro.
547Q9M0R7    132   ATL39_ARATH RING-H2 finger protein ATL39 OS=A...460.13     38.1     35     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
548Q12899    539   TRI26_HUMAN Tripartite motif-containing prote...450.13     40.4     44     58
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
549Q99496    336   RING2_HUMAN E3 ubiquitin-protein ligase RING2...430.13     40     44     58GO:0071339; C:MLL1 complex; IDA:UniProtKB.::GO:0035102; C:PRC1 complex; IDA:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0071535; F:RING-like zinc finger domain binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IDA:UniProtKB.
GO:0035518; P:histone H2A monoubiquitination; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
550P0CH03    366   AT21C_ARATH Putative RING-H2 finger protein A...550.14     40     35     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
551Q9SLC4    217   ATL40_ARATH RING-H2 finger protein ATL40 OS=A...500.14     39.3     36     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
552P0CH01    372   AT21A_ARATH Putative RING-H2 finger protein A...500.14     40     36     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0030247; F:polysaccharide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
553Q9CQJ4    336   RING2_MOUSE E3 ubiquitin-protein ligase RING2...430.14     40     44     58GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0016604; C:nuclear body; IDA:MGI.::GO:0001739; C:sex chromatin; IDA:MGI.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:MGI.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0009948; P:anterior/posterior axis specification; IMP:MGI.::GO:0001702; P:gastrulation with mouth forming second; IMP:MGI.::GO:0000278; P:mitotic cell cycle; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
554Q0V9R0    954   RN111_XENTR E3 ubiquitin-protein ligase arkad...420.14     40.4     40     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
555Q06436    670   MAG2_YEAST RING-finger protein MAG2 OS=Saccha...550.14     40.4     31     47GO:0005737; C:cytoplasm; IDA:SGD.
GO:0008270; F:zinc ion binding; IEA:InterPro.
556Q8H7N9    353   ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g...460.14     40     37     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
557O94400    571   YQF7_SCHPO PHD and RING finger domain-contain...280.15     40.4     46     64GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
558Q68DV7    783   RNF43_HUMAN RING finger protein 43 OS=Homo sa...410.15     40.4     41     56GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005635; C:nuclear envelope; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
559Q6NRV8    959   R111B_XENLA E3 ubiquitin-protein ligase arkad...420.15     40.4     40     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
560Q5ZMD4    408   TRI59_CHICK Tripartite motif-containing prote...820.15     40     33     41GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
561Q63HN8    5207   RN213_HUMAN E3 ubiquitin-protein ligase RNF21...480.15     40.4     35     48GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0016887; F:ATPase activity; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.
562P22470    610   SAN1_YEAST Protein SAN1 OS=Saccharomyces cere...260.16     40.4     42     62GO:0005737; C:cytoplasm; IMP:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0071630; P:nucleus-associated proteasomal ubiquitin-dependent protein catabolic process; IMP:SGD.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.
563Q8VC56    488   RNF8_MOUSE E3 ubiquitin-protein ligase RNF8 O...550.16     40     40     55GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0030496; C:midbody; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0042393; F:histone binding; IMP:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0033522; P:histone H2A ubiquitination; IMP:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; IMP:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
564Q8BTQ0    241   PCGF3_MOUSE Polycomb group RING finger protei...450.16     39.3     31     62GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
565Q5UPZ3    659   YR311_MIMIV Putative RING finger protein R311...1850.16     40     23     43
GO:0008270; F:zinc ion binding; IEA:InterPro.
566Q66J97    967   R111C_XENLA E3 ubiquitin-protein ligase arkad...420.17     40.4     40     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
567Q9ULK6    438   RN150_HUMAN RING finger protein 150 OS=Homo s...420.17     40     38     57GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
568Q7YR33    465   TRI15_PANTR Tripartite motif-containing prote...510.17     40     31     59GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
569Q6CWM4    663   BRE1_KLULA E3 ubiquitin-protein ligase BRE1 O...480.17     40     42     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
570Q92021    609   NF7B_XENLA Nuclear factor 7, brain OS=Xenopus...580.17     40     33     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
571Q4KLY4    308   RING2_RAT E3 ubiquitin-protein ligase RING2 O...430.18     39.7     44     58GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0035102; C:PRC1 complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0016567; P:protein ubiquitination; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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