Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR247C
Length:
1556
Number of sequences:
5887
Description:
YLR247C IRC20 SGDID:S000004237, Chr XII from 633354-628684, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative helicase; localizes to the mitochondrion and the nucleus; YLR247C is not an essential gene; null mutant displays increased levels of spontaneous Rad52p foci"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331Q9SK92    381   ATL15_ARATH E3 ubiquitin-protein ligase ATL15...480.005     44.7     38     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033591; P:response to L-ascorbic acid; IEP:TAIR.::GO:0009416; P:response to light stimulus; IEP:TAIR.
332Q6J6I9    1863   BRCA1_MACMU Breast cancer type 1 susceptibili...460.005     45.4     41     59GO:0031436; C:BRCA1-BARD1 complex; ISS:UniProtKB.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.::GO:0045717; P:negative regulation of fatty acid biosynthetic process; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0085020; P:protein K6-linked ubiquitination; ISS:UniProtKB.
333Q7T0Q3    312   R126A_XENLA RING finger protein 126-A OS=Xeno...440.005     44.3     34     52
GO:0008270; F:zinc ion binding; IEA:InterPro.
334Q8GUK7    243   RMA3_ARATH E3 ubiquitin-protein ligase RMA3 O...640.006     43.9     30     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
335Q6PJ69    517   TRI65_HUMAN Tripartite motif-containing prote...420.006     44.7     43     57GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
336Q09268    610   YQDA_CAEEL Uncharacterized RING finger protei...1090.006     45.1     29     50
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
337Q91648    326   BMI1A_XENLA Polycomb complex protein BMI-1-A ...440.006     44.3     43     59GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
338Q67YI6    411   ATL65_ARATH RING-H2 finger protein ATL65 OS=A...430.006     44.7     42     58GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
339Q757D9    643   BRE1_ASHGO E3 ubiquitin-protein ligase BRE1 O...930.006     44.7     34     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
340Q8RX29    217   ATL70_ARATH RING-H2 finger protein ATL70 OS=A...430.006     43.5     40     60GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
341Q3UF64    445   RNFT2_MOUSE RING finger and transmembrane dom...390.006     44.7     38     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
342Q0WX00    460   RNG1B_ARATH Putative E3 ubiquitin-protein lig...470.006     44.7     36     64GO:0035102; C:PRC1 complex; IPI:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0001709; P:cell fate determination; IMP:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010076; P:maintenance of floral meristem identity; IMP:UniProtKB.::GO:0010077; P:maintenance of inflorescence meristem identity; IMP:UniProtKB.::GO:0010492; P:maintenance of shoot apical meristem identity; IMP:UniProtKB.::GO:0045814; P:negative regulation of gene expression, epigenetic; IGI:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IGI:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
343Q4QFY1    1098   JBP2_LEIMA Bifunctional helicase and thymine ...2240.006     45.1     21     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
344Q80X56    500   TRI69_MOUSE Tripartite motif-containing prote...670.006     44.7     34     49GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
345Q9SZL4    145   ATL18_ARATH RING-H2 finger protein ATL18 OS=A...480.007     42.4     40     54GO:0031225; C:anchored to membrane; TAS:TAIR.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
346P35227    344   PCGF2_HUMAN Polycomb group RING finger protei...440.007     44.3     39     64GO:0035102; C:PRC1 complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
347Q8L9W3    163   ATL23_ARATH E3 ubiquitin-protein ligase ATL23...440.007     42.4     36     57GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
348Q6DIP3    311   RN126_XENTR RING finger protein 126 OS=Xenopu...440.007     43.9     34     52
GO:0008270; F:zinc ion binding; IEA:InterPro.
349Q6IRP0    312   R126B_XENLA RING finger protein 126-B OS=Xeno...440.007     43.9     34     52
GO:0008270; F:zinc ion binding; IEA:InterPro.
350Q9UKV5    643   AMFR2_HUMAN E3 ubiquitin-protein ligase AMFR ...460.007     44.7     33     57GO:0030176; C:integral to endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0000299; C:integral to membrane of membrane fraction; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:UniProtKB.::GO:0030433; P:ER-associated protein catabolic process; IDA:UniProtKB.::GO:0051259; P:protein oligomerization; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.
351P48754    1812   BRCA1_MOUSE Breast cancer type 1 susceptibili...460.007     45.1     43     59GO:0031436; C:BRCA1-BARD1 complex; ISS:UniProtKB.::GO:0005813; C:centrosome; TAS:UniProtKB.::GO:0000794; C:condensed nuclear chromosome; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003684; F:damaged DNA binding; IDA:MGI.::GO:0005515; F:protein binding; ISS:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051298; P:centrosome duplication; TAS:UniProtKB.::GO:0043009; P:chordate embryonic development; IMP:MGI.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IMP:MGI.::GO:0009048; P:dosage compensation by inactivation of X chromosome; IDA:MGI.::GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.::GO:0045717; P:negative regulation of fatty acid biosynthetic process; ISS:UniProtKB.::GO:0035067; P:negative regulation of histone acetylation; IMP:BHF-UCL.::GO:0051572; P:negative regulation of histone H3-K4 methylation; IMP:BHF-UCL.::GO:0051573; P:negative regulation of histone H3-K9 methylation; IMP:BHF-UCL.::GO:0051571; P:positive regulation of histone H3-K4 methylation; IMP:BHF-UCL.::GO:2000617; P:positive regulation of histone H3-K9 acetylation; IMP:BHF-UCL.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IMP:BHF-UCL.::GO:2000620; P:positive regulation of histone H4-K16 acetylation; IMP:BHF-UCL.::GO:0070512; P:positive regulation of histone H4-K20 methylation; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0085020; P:protein K6-linked ubiquitination; ISS:UniProtKB.::GO:0044030; P:regulation of DNA methylation; IMP:BHF-UCL.::GO:0006349; P:regulation of gene expression by genetic imprinting; IMP:BHF-UCL.
352Q96EX2    444   RNFT2_HUMAN RING finger and transmembrane dom...390.007     44.3     38     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
353Q99590    1463   SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens (H...400.007     44.7     45     53GO:0005634; C:nucleus; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB.
354Q9C7I1    327   ATL34_ARATH RING-H2 finger protein ATL34 OS=A...460.008     43.9     39     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
355Q9P1Y6    1649   PHRF1_HUMAN PHD and RING finger domain-contai...470.008     44.7     36     53
GO:0070063; F:RNA polymerase binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
356Q9FL42    159   ATL69_ARATH Putative RING-H2 finger protein A...430.008     42.4     40     56GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
357P23798    342   PCGF2_MOUSE Polycomb group RING finger protei...440.008     43.9     39     64GO:0016604; C:nuclear body; IDA:MGI.::GO:0035102; C:PRC1 complex; ISS:UniProtKB.::GO:0001739; C:sex chromatin; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0048704; P:embryonic skeletal system morphogenesis; IGI:MGI.::GO:0016573; P:histone acetylation; IGI:MGI.::GO:0001701; P:in utero embryonic development; IGI:MGI.::GO:0043066; P:negative regulation of apoptotic process; IGI:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
358Q9FL07    376   ATL46_ARATH RING-H2 finger protein ATL46 OS=A...440.008     43.9     39     64GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
359Q9LN71    408   RING1_ARATH E3 ubiquitin-protein ligase At1g1...640.008     44.3     38     52GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
360Q5A4X0    681   BRE1_CANAL E3 ubiquitin-protein ligase BRE1 O...480.008     44.3     40     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0030447; P:filamentous growth; IMP:CGD.
361P86449    446   TR43C_MOUSE Tripartite motif-containing prote...570.008     44.3     37     56GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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