Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR247C
Length:
1556
Number of sequences:
5887
Description:
YLR247C IRC20 SGDID:S000004237, Chr XII from 633354-628684, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative helicase; localizes to the mitochondrion and the nucleus; YLR247C is not an essential gene; null mutant displays increased levels of spontaneous Rad52p foci"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121Q7S133    1845   SWR1_NEUCR Helicase swr-1 OS=1257 / FGSC 987)...2230.43     38.9     21     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
122Q4IAK7    1691   SWR1_GIBZE Helicase SWR1 OS=(Wheat head bligh...1181.3     37.4     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
123Q04692    1021   SMRCD_MOUSE SWI/SNF-related matrix-associated...1190.00002     53.1     30     51GO:0000792; C:heterochromatin; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051304; P:chromosome separation; ISS:UniProtKB.::GO:0070932; P:histone H3 deacetylation; ISS:UniProtKB.::GO:0070933; P:histone H4 deacetylation; ISS:UniProtKB.::GO:0000018; P:regulation of DNA recombination; ISS:UniProtKB.
124P32597    1359   STH1_YEAST Nuclear protein STH1/NPS1 OS=Sacch...1830.004     45.8     25     46GO:0000775; C:chromosome, centromeric region; IDA:UniProtKB.::GO:0016586; C:RSC complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IDA:UniProtKB.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.::GO:0031055; P:chromatin remodeling at centromere; IMP:SGD.::GO:0007010; P:cytoskeleton organization; IGI:UniProtKB.::GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IMP:UniProtKB.::GO:0007126; P:meiosis; IMP:UniProtKB.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0016584; P:nucleosome positioning; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
125A5E0W5    1575   INO80_LODEL Putative DNA helicase ino80 OS=NB...1990.00004     52.4     26     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
126Q92698    747   RAD54_HUMAN DNA repair and recombination prot...1480.000009     54.3     29     47GO:0005634; C:nucleus; TAS:ProtInc.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007126; P:meiosis; TAS:ProtInc.
127O97159    1982   CHDM_DROME Chromodomain-helicase-DNA-binding ...1180.000009     54.3     29     50GO:0016581; C:NuRD complex; TAS:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IDA:FlyBase.::GO:0031491; F:nucleosome binding; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0042766; P:nucleosome mobilization; IDA:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
128B3NAN8    784   RAD54_DROER DNA repair and recombination prot...650.000009     54.3     37     60GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
129O76460    784   RAD54_DROME DNA repair and recombination prot...650.000009     54.3     37     60GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IMP:UniProtKB.::GO:0030261; P:chromosome condensation; TAS:FlyBase.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; IMP:UniProtKB.::GO:0046843; P:dorsal appendage formation; IMP:FlyBase.::GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; IMP:FlyBase.::GO:0008298; P:intracellular mRNA localization; TAS:FlyBase.::GO:0000711; P:meiotic DNA repair synthesis; IMP:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007131; P:reciprocal meiotic recombination; TAS:FlyBase.::GO:0006417; P:regulation of translation; TAS:FlyBase.::GO:0010212; P:response to ionizing radiation; IMP:UniProtKB.
130B4MX21    784   RAD54_DROWI DNA repair and recombination prot...2210.075     41.2     22     46GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
131B4NXB8    784   RAD54_DROYA DNA repair and recombination prot...650.00001     53.9     37     60GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
132Q74Z27    1414   INO80_ASHGO Putative DNA helicase INO80 OS=Y-...1960.0004     48.9     23     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
133Q9H4L7    1026   SMRCD_HUMAN SWI/SNF-related matrix-associated...1190.00003     52.8     30     51GO:0000792; C:heterochromatin; ISS:UniProtKB.::GO:0016363; C:nuclear matrix; NAS:UniProtKB.::GO:0043596; C:nuclear replication fork; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0051304; P:chromosome separation; IMP:UniProtKB.::GO:0070932; P:histone H3 deacetylation; IMP:UniProtKB.::GO:0070933; P:histone H4 deacetylation; IMP:UniProtKB.::GO:0009117; P:nucleotide metabolic process; NAS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0000018; P:regulation of DNA recombination; IEP:UniProtKB.
134Q8LC69    185   ATL8_ARATH RING-H2 finger protein ATL8 OS=Ara...610.00001     51.2     39     57GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
135O14981    1849   BTAF1_HUMAN TATA-binding protein-associated f...1850.024     43.1     23     45GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.
136Q91ZW3    1051   SMCA5_MOUSE SWI/SNF-related matrix-associated...2092.4     36.6     20     39GO:0005677; C:chromatin silencing complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0031491; F:nucleosome binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; IDA:UniProtKB.::GO:0006302; P:double-strand break repair; IMP:BHF-UCL.::GO:0009790; P:embryo development; IMP:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:MGI.
137O60264    1052   SMCA5_HUMAN SWI/SNF-related matrix-associated...2092.3     36.6     20     39GO:0000793; C:condensed chromosome; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0016589; C:NURF complex; IDA:UniProtKB.::GO:0031213; C:RSF complex; IPI:UniProtKB.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0016887; F:ATPase activity; IDA:UniProtKB.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0004386; F:helicase activity; TAS:ProtInc.::GO:0031491; F:nucleosome binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:Reactome.::GO:0016584; P:nucleosome positioning; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006352; P:transcription initiation, DNA-dependent; IDA:UniProtKB.
138Q6CA87    1772   SWR1_YARLI Helicase SWR1 OS=lipolytica). GN=S...2020.0002     50.1     26     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
139Q7XLY8    383   ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g...440.00001     52.8     45     64GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
140O12944    733   RAD54_CHICK DNA repair and recombination prot...2060.062     41.6     22     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
141D3Z9Z9    1024   SMRCD_RAT SWI/SNF-related matrix-associated a...1190.00002     53.1     30     51GO:0000792; C:heterochromatin; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051304; P:chromosome separation; ISS:UniProtKB.::GO:0070932; P:histone H3 deacetylation; ISS:UniProtKB.::GO:0070933; P:histone H4 deacetylation; ISS:UniProtKB.
142P40352    1085   RAD26_YEAST DNA repair and recombination prot...4530.005     45.4     21     38GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:SGD.
143P70270    747   RAD54_MOUSE DNA repair and recombination prot...2061.5     37     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051276; P:chromosome organization; IGI:MGI.::GO:0000724; P:double-strand break repair via homologous recombination; IGI:MGI.::GO:0042493; P:response to drug; IMP:MGI.::GO:0010212; P:response to ionizing radiation; IMP:MGI.
144A9X4T1    1365   CHD1_BOMMO Chromodomain-helicase-DNA-binding ...1180.00002     53.5     26     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
145Q7KU24    1883   CHD1_DROME Chromodomain-helicase-DNA-binding ...1840.027     43.1     23     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005705; C:polytene chromosome interband; IDA:FlyBase.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0035042; P:fertilization, exchange of chromosomal proteins; IMP:FlyBase.::GO:0007476; P:imaginal disc-derived wing morphogenesis; IMP:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
146Q9NRZ9    838   HELLS_HUMAN Lymphoid-specific helicase OS=Hom...1842.8     36.2     22     42GO:0005721; C:centromeric heterochromatin; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0031508; P:centromeric heterochromatin assembly; ISS:UniProtKB.::GO:0046651; P:lymphocyte proliferation; ISS:UniProtKB.::GO:0010216; P:maintenance of DNA methylation; ISS:UniProtKB.::GO:0006346; P:methylation-dependent chromatin silencing; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
147Q759G7    1486   SWR1_ASHGO Helicase SWR1 OS=Y-1056) (Yeast) (...1820.004     45.8     24     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
148Q568Y3    192   RN185_RAT E3 ubiquitin-protein ligase RNF185 ...860.00003     50.1     30     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.
149Q5RFK9    192   RN185_PONAB E3 ubiquitin-protein ligase RNF18...860.00003     50.1     30     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.
150Q91YT2    192   RN185_MOUSE E3 ubiquitin-protein ligase RNF18...860.00003     50.1     30     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.
151Q96GF1    192   RN185_HUMAN E3 ubiquitin-protein ligase RNF18...860.00003     50.1     30     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.
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