Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR234W
Length:
656
Number of sequences:
5887
Description:
YLR234W TOP3 SGDID:S000004224, Chr XII from 609783-611753, Genome Release 64-1-1, Verified ORF, "DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p to relax single-stranded negatively-supercoiled DNA preferentially, involved in telomere stability and regulation of mitotic recombination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q6G767    711   TOP3_STAAS DNA topoisomerase 3 OS=Staphylococ...4800.0000000000004     76.3     23     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
92Q7A455    711   TOP3_STAAN DNA topoisomerase 3 OS=Staphylococ...4800.0000000000004     76.3     23     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
93Q99S17    711   TOP3_STAAM DNA topoisomerase 3 OS=Staphylococ...4800.0000000000004     76.3     23     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
94Q5HDV4    711   TOP3_STAAC DNA topoisomerase 3 OS=Staphylococ...4800.0000000000004     76.3     23     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
95Q2FEN5    711   TOP3_STAA3 DNA topoisomerase 3 OS=Staphylococ...4800.0000000000004     76.3     23     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
96Q2FW03    711   TOP3_STAA8 DNA topoisomerase 3 OS=Staphylococ...4800.000000000001     75.1     23     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
97P34184    707   TOP1_BACPE DNA topoisomerase 1 OS=Bacillus ps...6200.000000000001     74.7     23     37GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
98Q9YCB6    1370   RGYR1_AERPE Reverse gyrase 1 OS=100138 / K1)....5890.000000000001     75.1     23     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
99P47368    709   TOP1_MYCGE DNA topoisomerase 1 OS=Mycoplasma ...4960.000000000002     73.9     22     38GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
100Q97ZF5    1166   RGYR2_SULSO Reverse gyrase 2 OS=P2). GN=rgy2 ...5310.00000000002     71.2     23     39GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
101Q49ZH2    712   TOP3_STAS1 DNA topoisomerase 3 OS=DSM 20229)....4700.00000000006     69.3     23     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
102P74759    1166   RGYR_SULSH Reverse gyrase OS=Sulfolobus shiba...5040.00000000007     69.3     23     39GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
103O51934    1104   RGYR_THEMA Reverse gyrase OS=Thermotoga marit...5170.00000000009     68.9     22     39GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
104O51768    848   TOP1_BORBU DNA topoisomerase 1 OS=4680). GN=t...5920.0000000001     68.6     20     39GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
105Q97ZZ8    1242   RGYR1_SULSO Reverse gyrase 1 OS=P2). GN=rgy1 ...3420.0000000002     68.2     25     43GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
106P78032    711   TOP1_MYCPN DNA topoisomerase 1 OS=Mycoplasma ...2970.0000000002     67.8     24     38GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
107P95479    1214   RGYR_PYRFU Reverse gyrase OS=Pyrococcus furio...5360.0000000002     67.8     22     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
108Q9UZ86    1214   RGYR_PYRAB Reverse gyrase OS=Pyrococcus abyss...5310.0000000003     67     21     40GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:HAMAP.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:HAMAP.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:HAMAP.
GO:0006265; P:DNA topological change; IEA:HAMAP.::GO:0006268; P:DNA unwinding involved in replication; IEA:HAMAP.
109Q5UQB5    854   TOP1P_MIMIV DNA topoisomerase 1 type prokaryo...6280.000000001     65.1     21     36GO:0005694; C:chromosome; IEA:InterPro.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
110Q08582    1248   RGYR_SULAC Reverse gyrase OS=NBRC 15157 / NCI...2620.00000002     61.6     23     43GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
111Q975P6    1233   RGYR2_SULTO Reverse gyrase 2 OS=Sulfolobus to...2610.00000003     60.8     25     43GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
112Q8ZXT5    1228   RGYR_PYRAE Reverse gyrase OS=/ NBRC 100827). ...5620.00000006     60.1     23     39GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
113Q5HLZ4    711   TOP3_STAEQ DNA topoisomerase 3 OS=Staphylococ...3510.000008     52.8     22     39GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
114Q4L8B8    711   TOP3_STAHJ DNA topoisomerase 3 OS=Staphylococ...4760.00001     52.4     23     38GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
115O58530    1624   RGYR_PYRHO Reverse gyrase OS=NBRC 100139 / OT...1950.005     43.9     23     47GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
116Q8CRF7    711   TOP3_STAES DNA topoisomerase 3 OS=Staphylococ...3510.00003     51.2     22     39GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
117Q8R979    1117   RGYR_THETN Reverse gyrase OS=100824 / MB4) (C...3770.0005     47.4     20     36GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
118Q971T7    1156   RGYR1_SULTO Reverse gyrase 1 OS=Sulfolobus to...5480.0008     46.6     19     37GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
119Q58907    1613   RGYR_METJA Reverse gyrase OS=JCM 10045 / NBRC...1680.005     43.9     29     42GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.::GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.::GO:0006314; P:intron homing; IEA:InterPro.
120P26540    518   VL2_HPV5B Minor capsid protein L2 OS=Human pa...460.76     36.6     43     57GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
121P36748    518   VL2_HPV12 Minor capsid protein L2 OS=Human pa...461.2     35.8     43     54GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
records
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