Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR222C
Length:
817
Number of sequences:
5887
Description:
YLR222C UTP13 SGDID:S000004212, Chr XII from 581771-579318, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901A1CGS0    295   SEC13_ASPCL Protein transport protein sec13 O...2348     33.1     23     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
902Q5AI86    350   EIF3I_CANAL Eukaryotic translation initiation...1035.4     33.9     22     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0035690; P:cellular response to drug; IMP:CGD.
903A5DVY3    350   EIF3I_LODEL Eukaryotic translation initiation...1480.18     38.5     24     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
904Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...2440.011     42.7     22     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
905P40217    347   EIF3I_YEAST Eukaryotic translation initiation...950.035     40.8     23     42GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:SGD.::GO:0043614; C:multi-eIF complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:SGD.
GO:0002188; P:translation reinitiation; IMP:SGD.
906A6ZMK5    347   EIF3I_YEAS7 Eukaryotic translation initiation...950.035     40.8     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
907Q6CKX3    347   EIF3I_KLULA Eukaryotic translation initiation...528.1     33.5     33     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
908Q6BIR9    394   CIAO1_DEBHA Probable cytosolic iron-sulfur pr...2180.084     39.7     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
909Q4I7L0    423   HAT2_GIBZE Histone acetyltransferase type B s...1400.0003     47.8     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
910P90794    571   DCA11_CAEEL DDB1- and CUL4-associated factor ...1190.0003     47.8     27     50GO:0005634; C:nucleus; IDA:WormBase.
GO:0008134; F:transcription factor binding; IPI:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:WormBase.::GO:0080135; P:regulation of cellular response to stress; IMP:WormBase.
911Q2GVT8    1258   SEC31_CHAGB Protein transport protein SEC31 O...795.2     34.3     37     47GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
912Q5E959    350   STRAP_BOVIN Serine-threonine kinase receptor-...666.6     33.5     30     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
913Q09373    507   FZY1_CAEEL WD repeat-containing protein fzy-1...1290.0004     47.8     26     48GO:0000793; C:condensed chromosome; IDA:WormBase.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0007091; P:mitotic metaphase/anaphase transition; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
914Q965S8    327   EIF3I_CAEEL Eukaryotic translation initiation...820.8     36.6     32     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
915A7ECP3    478   YTM1_SCLS1 Ribosome biogenesis protein ytm1 O...2350.046     40.8     26     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
916A3LX18    350   EIF3I_PICST Eukaryotic translation initiation...840.037     40.8     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
917Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...1141.6     35.8     27     42
918O22468    415   MSI2_ARATH WD-40 repeat-containing protein MS...1062.1     35.4     27     41GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
919A1CQL6    453   CIAO1_ASPCL Probable cytosolic iron-sulfur pr...1156.7     33.9     27     42
920Q2GSJ9    1080   HIR1_CHAGB Protein HIR1 OS=6347 / NRRL 1970) ...2960.0004     47.8     21     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
921C5DF48    457   LIS1_LACTC Nuclear distribution protein PAC1 ...640.071     40     34     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
922Q759L2    346   EIF3I_ASHGO Eukaryotic translation initiation...831.8     35.4     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
923Q13216    396   ERCC8_HUMAN DNA excision repair protein ERCC-...1190.21     38.5     24     50GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000109; C:nucleotide-excision repair complex; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.
GO:0045739; P:positive regulation of DNA repair; IMP:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0006979; P:response to oxidative stress; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:UniProtKB.
924Q8NA23    367   WDR31_HUMAN WD repeat-containing protein 31 O...1692.3     35     20     39
925Q2UPI0    438   CIAO1_ASPOR Probable cytosolic iron-sulfur pr...600.34     38.1     32     58
926B8MWR8    438   CIAO1_ASPFN Probable cytosolic iron-sulfur pr...600.34     38.1     32     58
927Q84JM4    1108   TPR3_ARATH Topless-related protein 3 OS=Arabi...5270.066     40.4     20     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
928P90917    412   RBA1_CAEEL Probable histone-binding protein r...1390.0005     47     26     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:WormBase.
GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
929P54198    1017   HIRA_HUMAN Protein HIRA OS=Homo sapiens (Huma...1896.2     34.3     22     36GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
930Q9D2V7    922   CORO7_MOUSE Coronin-7 OS=Mus musculus (Mouse)...2232.2     35.4     22     40GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
931Q12770    1279   SCAP_HUMAN Sterol regulatory element-binding ...1760.002     45.8     24     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; NAS:UniProtKB.
GO:0051082; F:unfolded protein binding; NAS:UniProtKB.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0045541; P:negative regulation of cholesterol biosynthetic process; NAS:UniProtKB.::GO:0045716; P:positive regulation of low-density lipoprotein particle receptor biosynthetic process; NAS:UniProtKB.::GO:0006994; P:positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway; IMP:UniProtKB.
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