Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR222C
Length:
817
Number of sequences:
5887
Description:
YLR222C UTP13 SGDID:S000004212, Chr XII from 581771-579318, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751O55106    780   STRN_MOUSE Striatin OS=Mus musculus (Mouse). ...2913.3     35     20     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
752Q54SD4    423   RBBD_DICDI Probable histone-binding protein r...1142.2     35.4     27     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
753A1DDL6    658   MDV1_NEOFI Mitochondrial division protein 1 O...611.1     36.6     31     56GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
754Q2KIY3    410   WDFY1_BOVIN WD repeat and FYVE domain-contain...3110.00001     52.4     24     41GO:0005769; C:early endosome; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
755B6HHJ8    440   ASA1_PENCW ASTRA-associated protein 1 OS=54-1...3850.014     42.4     22     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
756A2RA56    440   ASA1_ASPNC ASTRA-associated protein 1 OS=Aspe...648.3     33.5     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
757Q26458    425   ESC_DROVI Polycomb protein esc OS=Drosophila ...1661.1     36.2     20     42GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0048096; P:chromatin-mediated maintenance of transcription; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
758A7MB12    519   UTP15_BOVIN U3 small nucleolar RNA-associated...1320.003     44.7     22     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
759A8PTE4    674   MDV1_MALGO Mitochondrial division protein 1 O...1050.079     40     26     53GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
760Q8N157    1196   AHI1_HUMAN Jouberin OS=Homo sapiens (Human). ...575.6     34.3     32     58GO:0005912; C:adherens junction; IDA:UniProtKB.::GO:0005911; C:cell-cell junction; IDA:UniProtKB.::GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0036038; C:TCTN-B9D complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0035844; P:cloaca development; ISS:UniProtKB.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0030902; P:hindbrain development; ISS:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0071599; P:otic vesicle development; ISS:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; ISS:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; ISS:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; ISS:UniProtKB.::GO:0050795; P:regulation of behavior; ISS:UniProtKB.::GO:0010842; P:retina layer formation; ISS:UniProtKB.::GO:0065001; P:specification of axis polarity; ISS:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; ISS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; ISS:UniProtKB.
761Q0CXH9    336   EIF3I_ASPTN Eukaryotic translation initiation...396     33.9     36     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
762P49177    377   GBB_ARATH Guanine nucleotide-binding protein ...3120.005     43.5     21     37GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005783; C:endoplasmic reticulum; IDA:TAIR.::GO:0005834; C:heterotrimeric G-protein complex; IPI:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009817; P:defense response to fungus, incompatible interaction; IMP:TAIR.::GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:TAIR.::GO:0010154; P:fruit development; IMP:TAIR.::GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.::GO:0048527; P:lateral root development; IMP:TAIR.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0009887; P:organ morphogenesis; IMP:TAIR.::GO:0072593; P:reactive oxygen species metabolic process; IMP:TAIR.::GO:0009723; P:response to ethylene stimulus; IMP:TAIR.::GO:0009845; P:seed germination; IEP:UniProtKB.
763Q55AR8    355   SNR40_DICDI U5 small nuclear ribonucleoprotei...1850.059     40     25     41GO:0005681; C:spliceosomal complex; ISS:dictyBase.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:dictyBase.
764Q4R4J2    461   COR1A_MACFA Coronin-1A OS=Macaca fascicularis...1220.00001     52     29     51GO:0005938; C:cell cortex; IEA:UniProtKB-SubCell.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
765Q05048    431   CSTF1_HUMAN Cleavage stimulation factor subun...2590.2     38.5     21     44GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
766Q9R1A8    733   RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2...1910.00001     52.4     21     41GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
767Q8NHY2    731   RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2...1910.00001     52.4     21     41GO:0005813; C:centrosome; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
768Q9P7C0    524   YKU5_SCHPO Uncharacterized WD repeat-containi...790.82     37     23     43GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
769P70483    780   STRN_RAT Striatin OS=Rattus norvegicus (Rat)....1131.1     36.6     21     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0014069; C:postsynaptic density; IDA:RGD.::GO:0045211; C:postsynaptic membrane; IDA:RGD.
GO:0048306; F:calcium-dependent protein binding; NAS:RGD.::GO:0005516; F:calmodulin binding; IDA:RGD.
GO:0016358; P:dendrite development; IMP:RGD.::GO:0007626; P:locomotory behavior; IMP:RGD.
770P53196    417   RPN14_YEAST 26S proteasome regulatory subunit...890.007     43.1     25     48GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0070682; P:proteasome regulatory particle assembly; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
771A7EF03    335   EIF3I_SCLS1 Eukaryotic translation initiation...740.26     38.1     27     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
772Q8IZU2    1322   WDR17_HUMAN WD repeat-containing protein 17 O...1190.45     37.7     27     46
773Q54PP7    1154   LVSF_DICDI BEACH domain-containing protein lv...1160.00002     52.4     33     53
774Q5ZKU8    369   PK1IP_CHICK p21-activated protein kinase-inte...1250.007     43.1     23     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
775Q28D01    614   WDR26_XENTR WD repeat-containing protein 26 O...3050.12     39.7     20     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
776Q920M5    471   CORO6_MOUSE Coronin-6 OS=Mus musculus (Mouse)...1119.2     33.5     23     48GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
777A6RUL1    335   EIF3I_BOTFB Eukaryotic translation initiation...740.24     38.1     27     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
778Q7RXH4    346   EIF3I_NEUCR Eukaryotic translation initiation...773.6     34.7     29     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
779Q91ZN1    461   COR1A_RAT Coronin-1A OS=Rattus norvegicus (Ra...1210.00002     51.6     29     50GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0030027; C:lamellipodium; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030595; P:leukocyte chemotaxis; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; IBA:RefGenome.::GO:0001845; P:phagolysosome assembly; IBA:RefGenome.::GO:0050918; P:positive chemotaxis; IBA:RefGenome.::GO:0008360; P:regulation of cell shape; IBA:RefGenome.::GO:0030217; P:T cell differentiation; NAS:RGD.::GO:0032796; P:uropod organization; IBA:RefGenome.
780Q61Y48    416   LIN53_CAEBR Probable histone-binding protein ...3110.47     37.4     20     37GO:0017053; C:transcriptional repressor complex; ISS:UniProtKB.
GO:0042826; F:histone deacetylase binding; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; ISS:UniProtKB.::GO:0040035; P:hermaphrodite genitalia development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
781Q04725    743   TLE2_HUMAN Transducin-like enhancer protein 2...1091.2     36.6     22     38GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 751 - 780
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::