Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR222C
Length:
817
Number of sequences:
5887
Description:
YLR222C UTP13 SGDID:S000004212, Chr XII from 581771-579318, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301Q6P1V3    422   WSB1_XENTR WD repeat and SOCS box-containing ...896.7     33.9     31     48
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
302Q9NYS7    404   WSB2_HUMAN WD repeat and SOCS box-containing ...1730.35     37.7     26     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
303Q6GM65    799   PLAP_XENLA Phospholipase A-2-activating prote...1100.000009     53.1     37     52
GO:0005488; F:binding; IEA:InterPro.
304P38123    315   SWD3_YEAST COMPASS component SWD3 OS=Saccharo...2100.000002     53.9     22     47GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
305Q7ZVA0    513   SMU1_DANRE WD40 repeat-containing protein SMU...1790.001     45.8     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
306A1C7E4    700   SCONB_ASPCL Probable E3 ubiquitin ligase comp...1422.5     35.4     23     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
307P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...980.081     40.4     29     49GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
308Q7ZUV2    694   KTNB1_DANRE Katanin p80 WD40-containing subun...1230.27     38.5     25     45GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
309Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...1660.28     38.5     22     41GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
310Q6PBD6    305   WDR61_XENTR WD repeat-containing protein 61 O...1580.0002     47.8     25     46GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
311B4J8H6    667   WDR48_DROGR WD repeat-containing protein 48 h...4268.1     33.5     21     40
312B8M7Q5    667   SCONB_TALSN Probable E3 ubiquitin ligase comp...1240.15     39.3     26     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
313A4IIX9    494   WDR37_XENTR WD repeat-containing protein 37 O...1303.8     34.7     25     41
314Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...2300.002     45.1     23     38GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
315B5X9P2    330   CIO1A_SALSA Probable cytosolic iron-sulfur pr...2190.0001     48.5     22     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
316B6Q4Z5    660   SCONB_PENMQ Probable E3 ubiquitin ligase comp...4460.0001     49.3     21     38
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
317Q20168    1000   COPB2_CAEEL Probable coatomer subunit beta' O...1743     35     22     41GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048599; P:oocyte development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
318B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...1900.028     41.2     22     38
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
319Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...2160.17     38.9     20     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
320Q3UKJ7    513   SMU1_MOUSE WD40 repeat-containing protein SMU...1840.001     46.2     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
321Q2TAY7    513   SMU1_HUMAN WD40 repeat-containing protein SMU...1840.001     46.2     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
322Q76B40    513   SMU1_CRIGR WD40 repeat-containing protein SMU...1840.001     46.2     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
323Q2TBS9    513   SMU1_BOVIN WD40 repeat-containing protein SMU...1840.001     46.2     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
324Q99M63    513   SMU1_RAT WD40 repeat-containing protein SMU1 ...1840.001     46.2     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
325A1DHW6    689   SCONB_NEOFI Probable E3 ubiquitin ligase comp...3280.003     45.1     21     39
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
326Q6NRT3    513   SMU1_XENLA WD40 repeat-containing protein SMU...1840.001     45.8     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
327Q5ZME8    513   SMU1_CHICK WD40 repeat-containing protein SMU...1840.002     45.4     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
328C5FP68    674   SCONB_ARTOC Probable E3 ubiquitin ligase comp...1930.21     38.9     26     44
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
329Q93134    316   GBLP_BIOGL Guanine nucleotide-binding protein...1633.1     34.7     25     40
330Q01277    650   SCONB_NEUCR Probable E3 ubiquitin ligase comp...985.5     34.3     27     43
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
331Q9SJT9    1218   COPA2_ARATH Coatomer subunit alpha-2 OS=Arabi...901.4     36.2     26     47GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 301 - 330
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::