Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR222C
Length:
817
Number of sequences:
5887
Description:
YLR222C UTP13 SGDID:S000004212, Chr XII from 581771-579318, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271Q6ZMY6    472   WDR88_HUMAN WD repeat-containing protein 88 O...791.4     35.8     27     44
272O14170    703   POP2_SCHPO WD repeat-containing protein pop2 ...1100.0006     47     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005635; C:nuclear envelope; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0032876; P:negative regulation of DNA endoreduplication; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:PomBase.
273O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...3790.35     37.7     18     33GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
274B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...1320.0000007     55.8     29     46
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
275Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...581.8     35.8     24     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
276Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...1854.2     34.7     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
277B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...1320.0000005     56.2     29     46
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
278Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...2100.12     39.3     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
279Q9AUR8    1218   COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza...1660.27     38.5     22     41GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
280Q9FLX9    473   NLE1_ARATH Notchless protein homolog OS=Arabi...1070.15     39.3     26     49GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
281P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...1510.41     38.1     22     44GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
282Q5RAC9    607   A16L1_PONAB Autophagy-related protein 16-1 OS...1511.7     35.8     23     46GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
283Q54SF9    941   MHCKD_DICDI Myosin heavy chain kinase D OS=Di...2040.16     39.3     21     38
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; ISS:dictyBase.
GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.
284Q42384    486   PRL1_ARATH Protein pleiotropic regulatory loc...1380.002     45.1     25     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048825; P:cotyledon development; IMP:TAIR.::GO:0009870; P:defense response signaling pathway, resistance gene-dependent; IMP:TAIR.::GO:0010204; P:defense response signaling pathway, resistance gene-independent; IMP:TAIR.::GO:0042742; P:defense response to bacterium; IMP:TAIR.::GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0009755; P:hormone-mediated signaling pathway; IMP:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0006508; P:proteolysis; IMP:TAIR.::GO:0009749; P:response to glucose stimulus; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0010182; P:sugar mediated signaling pathway; IMP:TAIR.
285Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...1860.21     38.5     25     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
286O24456    327   GBLPA_ARATH Guanine nucleotide-binding protei...2370.11     39.3     24     42GO:0009507; C:chloroplast; IDA:TAIR.::GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.
287Q6GMD2    305   WDR61_XENLA WD repeat-containing protein 61 O...1360.0001     48.9     26     49GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
288P56094    682   TUP1_KLULA General transcriptional corepresso...3240.0005     47.4     23     40
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
289Q3MHE2    521   PRP4_BOVIN U4/U6 small nuclear ribonucleoprot...806.1     33.9     28     41GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
290O61585    690   KTNB1_STRPU Katanin p80 WD40-containing subun...920.63     37.4     23     48GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
291Q8MY12    780   MHCKC_DICDI Myosin heavy chain kinase C OS=Di...1820.031     41.6     25     41GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.::GO:0032154; C:cleavage furrow; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IMP:dictyBase.::GO:0045159; F:myosin II binding; ISS:dictyBase.
GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.
292Q5RF51    357   SNR40_PONAB U5 small nuclear ribonucleoprotei...1730.0004     47     26     44GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
293O43172    522   PRP4_HUMAN U4/U6 small nuclear ribonucleoprot...808     33.5     28     41GO:0015030; C:Cajal body; IDA:BHF-UCL.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; NAS:UniProtKB.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:BHF-UCL.
294Q5NVD0    521   PRP4_PONAB U4/U6 small nuclear ribonucleoprot...807     33.9     28     41GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
295Q94A40    1216   COPA1_ARATH Coatomer subunit alpha-1 OS=Arabi...861.8     35.8     27     48GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
296Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...806.2     33.9     28     41GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
297P25387    318   GBLP_CHLRE Guanine nucleotide-binding protein...1610.23     38.1     25     42
298Q39190    479   PRL2_ARATH Protein pleiotropic regulator PRL2...1710.12     39.3     20     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
299Q54RP0    648   AGTA_DICDI UDP-galactose:fucoside alpha-3-gal...2520.015     42.4     24     41GO:0005737; C:cytoplasm; TAS:dictyBase.
GO:0004381; F:fucosylgalactoside 3-alpha-galactosyltransferase activity; IEA:EC.
GO:0006486; P:protein glycosylation; IDA:dictyBase.
300P49846    704   TAF5_DROME Transcription initiation factor TF...1220.62     37.4     22     48GO:0000124; C:SAGA complex; IPI:FlyBase.::GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:GOC.
301Q6P1V3    422   WSB1_XENTR WD repeat and SOCS box-containing ...896.7     33.9     31     48
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
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