Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR222C
Length:
817
Number of sequences:
5887
Description:
YLR222C UTP13 SGDID:S000004212, Chr XII from 581771-579318, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q10281    314   GBLP_SCHPO Guanine nucleotide-binding protein...1653     34.7     26     43GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005080; F:protein kinase C binding; IPI:PomBase.::GO:0043022; F:ribosome binding; IDA:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0035556; P:intracellular signal transduction; IMP:PomBase.::GO:2000766; P:negative regulation of cytoplasmic translation; ISS:PomBase.::GO:0031139; P:positive regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0032956; P:regulation of actin cytoskeleton organization; IGI:PomBase.::GO:0032995; P:regulation of fungal-type cell wall biogenesis; IGI:PomBase.
242Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...1820.068     40     24     41
243Q9VZF4    1326   FBXW7_DROME F-box/WD repeat-containing protei...2360.00000005     60.8     23     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0019005; C:SCF ubiquitin ligase complex; NAS:FlyBase.
GO:0030332; F:cyclin binding; TAS:FlyBase.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0008054; P:cyclin catabolic process; TAS:FlyBase.::GO:0042023; P:DNA endoreduplication; IMP:FlyBase.::GO:0060253; P:negative regulation of glial cell proliferation; IGI:FlyBase.::GO:0045926; P:negative regulation of growth; IMP:FlyBase.::GO:0007096; P:regulation of exit from mitosis; TAS:FlyBase.::GO:0007088; P:regulation of mitosis; IMP:FlyBase.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.
244Q9AUR7    1218   COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza...1701.9     35.8     18     41GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
245P27612    794   PLAP_MOUSE Phospholipase A-2-activating prote...1080.00002     52     34     50
GO:0016005; F:phospholipase A2 activator activity; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.
GO:0006954; P:inflammatory response; IDA:MGI.
246Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1810.31     38.1     25     39GO:0005730; C:nucleolus; IDA:HPA.
247Q6NVM2    655   KTNB1_XENTR Katanin p80 WD40-containing subun...962     35.8     26     52GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
248Q9VU65    391   POC1_DROME POC1 centriolar protein homolog OS...3110.022     41.6     21     39
GO:0051297; P:centrosome organization; IMP:FlyBase.
249O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...1552.5     35.4     24     41GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
250Q96DI7    357   SNR40_HUMAN U5 small nuclear ribonucleoprotei...1730.0004     47     26     44GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005732; C:small nucleolar ribonucleoprotein complex; NAS:UniProtKB.::GO:0005682; C:U5 snRNP; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
251Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...1730.0003     47.4     26     44GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
252Q39336    327   GBLP_BRANA Guanine nucleotide-binding protein...1521.6     35.8     24     43
253O42248    317   GBLP_DANRE Guanine nucleotide-binding protein...1860.28     38.1     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IMP:ZFIN.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:2000543; P:positive regulation of gastrulation; IMP:UniProtKB.::GO:0051302; P:regulation of cell division; IMP:UniProtKB.::GO:2000114; P:regulation of establishment of cell polarity; IMP:UniProtKB.::GO:0032880; P:regulation of protein localization; IMP:UniProtKB.
254Q6PE01    358   SNR40_MOUSE U5 small nuclear ribonucleoprotei...1730.0003     47.8     26     44
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
255C4JZS6    446   LIS11_UNCRE Nuclear distribution protein PAC1...1440.001     45.8     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
256Q758R7    715   MDV1_ASHGO Mitochondrial division protein 1 O...1930.0007     47     26     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
257Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...904.7     34.3     32     49GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
258Q6CKE8    434   PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS...1570.56     37.4     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
259Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...1810.3     38.1     25     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
260P41318    303   LST8_YEAST Target of rapamycin complex subuni...1456.8     33.5     23     46GO:0010008; C:endosome membrane; IDA:SGD.::GO:0031234; C:extrinsic to internal side of plasma membrane; IDA:SGD.::GO:0000139; C:Golgi membrane; IDA:SGD.::GO:0000300; C:peripheral to membrane of membrane fraction; IDA:SGD.::GO:0031931; C:TORC1 complex; IPI:SGD.::GO:0031932; C:TORC2 complex; IPI:SGD.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030295; F:protein kinase activator activity; IMP:SGD.
GO:0030950; P:establishment or maintenance of actin cytoskeleton polarity; IMP:SGD.::GO:0031505; P:fungal-type cell wall organization; IMP:SGD.::GO:0031930; P:mitochondria-nucleus signaling pathway; IMP:SGD.::GO:0031929; P:TOR signaling cascade; IMP:SGD.::GO:0006810; P:transport; IMP:SGD.
261O62621    914   COPB2_DROME Coatomer subunit beta' OS=Drosoph...960.57     37.4     28     45GO:0030126; C:COPI vesicle coat; NAS:UniProtKB.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; NAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0010883; P:regulation of lipid storage; IDA:FlyBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; NAS:UniProtKB.
262O54929    404   WSB2_MOUSE WD repeat and SOCS box-containing ...1841.5     35.8     20     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
263Q54PE0    922   PWP2_DICDI Periodic tryptophan protein 2 homo...700.2     38.9     27     59GO:0005829; C:cytosol; ISS:dictyBase.::GO:0005730; C:nucleolus; ISS:dictyBase.
GO:0030515; F:snoRNA binding; ISS:dictyBase.
GO:0006364; P:rRNA processing; ISS:dictyBase.
264Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...1361.2     36.2     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
265P53699    684   CDC4_CANAX Cell division control protein 4 OS...1265.1     34.3     24     41
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
266B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...2190.0002     48.1     22     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
267B3MC74    335   CIAO1_DROAN Probable cytosolic iron-sulfur pr...2890.000002     54.7     24     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
268P42527    1146   MHCKA_DICDI Myosin heavy chain kinase A OS=Di...1640.47     37.7     26     43GO:0005938; C:cell cortex; IDA:dictyBase.
GO:0051015; F:actin filament binding; IDA:dictyBase.::GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016887; F:ATPase activity; IDA:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
GO:0051764; P:actin crosslink formation; IDA:dictyBase.::GO:0051017; P:actin filament bundle assembly; IDA:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IDA:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.::GO:0051260; P:protein homooligomerization; IDA:dictyBase.
269Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...1810.032     41.2     25     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
270P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...1810.029     41.6     27     46GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
271Q6ZMY6    472   WDR88_HUMAN WD repeat-containing protein 88 O...791.4     35.8     27     44
records
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