Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR221C
Length:
220
Number of sequences:
5887
Description:
YLR221C RSA3 SGDID:S000004211, Chr XII from 579024-578362, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein with a likely role in ribosomal maturation, required for accumulation of wild-type levels of large (60S) ribosomal subunits; binds to the helicase Dbp6p in pre-60S ribosomal particles in the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q05942    220   RSA3_YEAST Ribosome assembly protein 3 OS=Sac...2202e-154     434     100     100GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0000027; P:ribosomal large subunit assembly; IPI:SGD.
2Q74ZL7    198   RSA3_ASHGO Ribosome assembly protein 3 OS=Y-1...1527e-18     82.4     39     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
3Q6CK62    203   RSA3_KLULA Ribosome assembly protein 3 OS=126...1182e-16     78.2     38     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
4Q6FX31    190   RSA3_CANGA Ribosome assembly protein 3 OS=NRR...1510.00000000000001     73.2     32     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
5Q59VF9    195   RSA3_CANAL Ribosome assembly protein 3 OS=Can...660.00000000002     63.9     48     65GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
6Q6BWS4    191   RSA3_DEBHA Ribosome assembly protein 3 OS=008...600.000000001     58.9     47     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
7Q6C818    159   RSA3_YARLI Ribosome assembly protein 3 OS=lip...550.00007     45.1     33     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
8Q5QT59    152   RSA3_PICAD Ribosome assembly protein 3 OS=(Ha...510.007     39.3     41     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
9Q6FPQ3    1052   MPH1_CANGA ATP-dependent DNA helicase MPH1 OS...1160.34     35.4     30     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
10Q3U3D7    1597   T131L_MOUSE Transmembrane protein 131-like OS...910.43     35.4     27     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
11O43024    963   YGVA_SCHPO CUE domain-containing protein C354...910.79     34.3     25     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; ISS:PomBase.
GO:0000723; P:telomere maintenance; ISS:PomBase.::GO:0006283; P:transcription-coupled nucleotide-excision repair; ISS:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase.
12Q93971    2032   TRPG_CAEEL Transient receptor potential chann...641.5     33.5     30     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005216; F:ion channel activity; IEA:UniProtKB-KW.
GO:0008406; P:gonad development; IMP:UniProtKB.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0007067; P:mitosis; IMP:UniProtKB.
13P43565    1770   RIM15_YEAST Serine/threonine-protein kinase R...891.7     33.5     29     46GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004674; F:protein serine/threonine kinase activity; ISS:SGD.::GO:0000156; F:two-component response regulator activity; IEA:InterPro.
GO:0001324; P:age-dependent response to oxidative stress involved in chronological cell aging; IMP:SGD.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0040020; P:regulation of meiosis; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
14Q8K2A6    422   LIPM_MOUSE Lipase member M OS=Mus musculus (M...902     32.7     33     49GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
15Q5BL44    685   S20A1_XENTR Sodium-dependent phosphate transp...573     32.3     28     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005315; F:inorganic phosphate transmembrane transporter activity; IEA:InterPro.::GO:0015293; F:symporter activity; IEA:UniProtKB-KW.
16Q4IPN9    864   YSH1_GIBZE Endoribonuclease YSH1 OS=(Wheat he...297.6     31.2     45     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
17Q757I9    285   REXO4_ASHGO RNA exonuclease 4 OS=Y-1056) (Yea...808.4     30.8     30     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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