Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR208W
Length:
297
Number of sequences:
5887
Description:
YLR208W SEC13 SGDID:S000004198, Chr XII from 559551-560444, Genome Release 64-1-1, Verified ORF, "Component of the Nup84 nuclear pore sub-complex, the Sec13p-Sec31p complex of the COPII vesicle coat, and the SEA (Seh1-associated) complex; required for vesicle formation in ER to Golgi transport and nuclear pore complex organization; the Nup84 subcomplex has a role in transcription elongation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
961Q6DIF4    607   WDR1_XENTR WD repeat-containing protein 1 OS=...1164.6     32.7     25     41GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
962Q6GPU3    711   DTLB_XENLA Denticleless protein homolog B OS=...1446.6     32     22     40GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
963Q8NFH3    380   NUP43_HUMAN Nucleoporin Nup43 OS=Homo sapiens...1254.7     32.3     28     42GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
964Q7ZVA0    513   SMU1_DANRE WD40 repeat-containing protein SMU...1305.1     32.3     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
965Q1DHE1    1061   HIR1_COCIM Protein HIR1 OS=Coccidioides immit...1376.5     32.3     23     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
966Q6BIR7    994   HIR2_DEBHA Protein HIR2 OS=0083 / IGC 2968) (...2105.1     32.7     20     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
967Q64LD2    544   WDR25_HUMAN WD repeat-containing protein 25 O...1985.1     32.3     24     41
968Q5FW06    457   DCA10_XENTR DDB1- and CUL4-associated factor ...815.1     32.3     28     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
969P36408    347   GBB_DICDI Guanine nucleotide-binding protein ...1425.2     32.3     27     42GO:0005834; C:heterotrimeric G-protein complex; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0031682; F:G-protein gamma-subunit binding; IDA:dictyBase.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007190; P:activation of adenylate cyclase activity; TAS:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0043326; P:chemotaxis to folate; IMP:dictyBase.::GO:0007188; P:G-protein signaling, coupled to cAMP nucleotide second messenger; IDA:dictyBase.::GO:0032320; P:positive regulation of Ras GTPase activity; IMP:dictyBase.::GO:0030826; P:regulation of cGMP biosynthetic process; TAS:dictyBase.
970P78798    308   PEX7_SCHPO Peroxisomal targeting signal 2 rec...605.3     32     37     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005782; C:peroxisomal matrix; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IEA:InterPro.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
971Q5AGM0    1017   HIR2_CANAL Protein HIR2 OS=Candida albicans (...1415.3     32.3     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
972Q5I0B9    622   ATG16_XENTR Autophagy-related protein 16 OS=X...905.3     32.3     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
973P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...625.4     32.3     32     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
974O13686    1323   WDR59_SCHPO Uncharacterized RWD, RING finger ...1745.4     32.3     24     44GO:0000329; C:fungal-type vacuole membrane; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
975Q9UNX4    943   WDR3_HUMAN WD repeat-containing protein 3 OS=...2315.4     32.3     23     40GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
976P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...675.5     32.3     36     54
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
977P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...625.5     32.3     32     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
978A2AKB9    566   DCA10_MOUSE DDB1- and CUL4-associated factor ...815.6     32.3     28     52GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
979P40217    347   EIF3I_YEAST Eukaryotic translation initiation...2225.8     32     22     40GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:SGD.::GO:0043614; C:multi-eIF complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:SGD.
GO:0002188; P:translation reinitiation; IMP:SGD.
980A6ZMK5    347   EIF3I_YEAS7 Eukaryotic translation initiation...2225.8     32     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
981A7Z052    1124   WDR6_BOVIN WD repeat-containing protein 6 OS=...1025.8     32.3     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
982Q9NV06    445   DCA13_HUMAN DDB1- and CUL4-associated factor ...2905.9     32.3     21     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
983Q9NW82    654   WDR70_HUMAN WD repeat-containing protein 70 O...2306     32.3     23     37
984Q8IWA0    830   WDR75_HUMAN WD repeat-containing protein 75 O...1136     32.3     26     44GO:0005634; C:nucleus; IDA:HPA.
985Q39578    683   DYI2_CHLRE Dynein, 78 kDa intermediate chain,...1266.1     32.3     27     42GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
986Q5AI86    350   EIF3I_CANAL Eukaryotic translation initiation...2696.2     32     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0035690; P:cellular response to drug; IMP:CGD.
987B2ZZS9    400   WDR55_ORYLA WD repeat-containing protein 55 O...1886.3     32     24     40GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0001654; P:eye development; IMP:UniProtKB.::GO:0060322; P:head development; IMP:UniProtKB.::GO:0001889; P:liver development; IMP:UniProtKB.::GO:0060465; P:pharynx development; IMP:UniProtKB.::GO:0006364; P:rRNA processing; IMP:UniProtKB.::GO:0048536; P:spleen development; IMP:UniProtKB.::GO:0048538; P:thymus development; IMP:UniProtKB.
988Q9R1A8    733   RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2...1646.3     32.3     24     43GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
989Q5QP82    559   DCA10_HUMAN DDB1- and CUL4-associated factor ...906.4     32     27     52GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
990Q6CB13    565   MDV1_YARLI Mitochondrial division protein 1 O...1176.4     32     24     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
991P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...2646.6     32     21     39GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
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