Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR208W
Length:
297
Number of sequences:
5887
Description:
YLR208W SEC13 SGDID:S000004198, Chr XII from 559551-560444, Genome Release 64-1-1, Verified ORF, "Component of the Nup84 nuclear pore sub-complex, the Sec13p-Sec31p complex of the COPII vesicle coat, and the SEA (Seh1-associated) complex; required for vesicle formation in ER to Golgi transport and nuclear pore complex organization; the Nup84 subcomplex has a role in transcription elongation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901Q9LPV9    346   LWD1_ARATH WD repeat-containing protein LWD1 ...921.6     33.9     26     53GO:0005634; C:nucleus; IDA:TAIR.
GO:0044212; F:transcription regulatory region DNA binding; IDA:TAIR.
GO:0009718; P:anthocyanin biosynthetic process; NAS:TAIR.::GO:0043153; P:entrainment of circadian clock by photoperiod; IEP:TAIR.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
902Q7K0L4    630   WDR26_DROME WD repeat-containing protein 26 h...791.6     33.9     37     49GO:0005737; C:cytoplasm; ISS:UniProtKB.
903A4RD35    1269   SEC31_MAGO7 Protein transport protein SEC31 O...1247.3     32     29     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
904Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...591.6     34.3     32     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
905Q5EB92    655   WDR70_RAT WD repeat-containing protein 70 OS=...2311.6     33.9     24     39
906A1C7E4    700   SCONB_ASPCL Probable E3 ubiquitin ligase comp...1991.6     33.9     25     38
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
907O59894    376   PEX7_PICPA Peroxisomal targeting signal 2 rec...785.3     32.3     24     47GO:0005777; C:peroxisome; IEA:UniProtKB-SubCell.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
908Q16MY0    659   WDR48_AEDAE WD repeat-containing protein 48 h...1158.3     32     23     43
909O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...891.7     33.9     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
910Q2UFN8    705   SCONB_ASPOR Probable E3 ubiquitin ligase comp...1713.2     33.1     26     39
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
911Q8L4M1    367   DWA1_ARATH WD repeat-containing protein DWA1 ...2531.8     33.9     26     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0010267; P:production of ta-siRNAs involved in RNA interference; IMP:TAIR.::GO:0016567; P:protein ubiquitination; IMP:UniProtKB.
912Q10990    490   CDT2_SCHPO Cell division cycle protein cdt2 O...3151.8     33.9     23     37GO:0005634; C:nucleus; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0000077; P:DNA damage checkpoint; IGI:PomBase.::GO:0006261; P:DNA-dependent DNA replication; IMP:PomBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0051443; P:positive regulation of ubiquitin-protein ligase activity; IMP:PomBase.::GO:0006279; P:premeiotic DNA replication; IMP:PomBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:PomBase.
913Q2KID6    513   PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos ta...631.8     33.9     40     49GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
914B8NGT5    706   SCONB_ASPFN Probable E3 ubiquitin ligase comp...1713.7     33.1     26     39
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
915P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...1147.7     32     31     43GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
916Q5ZJW8    720   DTL_CHICK Denticleless protein homolog OS=Gal...626.6     32     32     48GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
917Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1744.9     32.3     27     39
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
918B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...1744.9     32.3     27     39
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
919Q5ACW8    853   HIR1_CANAL Protein HIR1 OS=Candida albicans (...2732.3     33.5     21     36GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
920Q922V4    513   PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus mu...632.2     33.5     40     49GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
921Q8AVS9    457   DCA10_XENLA DDB1- and CUL4-associated factor ...1148.2     31.6     29     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
922Q9WUC8    514   PLRG1_RAT Pleiotropic regulator 1 OS=Rattus n...632.2     33.5     40     49GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
923O43660    514   PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo s...632.2     33.5     40     49GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
924Q09731    962   BU107_SCHPO UBP9-binding protein bun107 OS=Sc...647.7     32     27     47GO:0051285; C:cell cortex of cell tip; IDA:PomBase.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0030428; C:cell septum; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:2000158; P:positive regulation of ubiquitin-specific protease activity; IMP:PomBase.
925Q9VAT2    621   DCA10_DROME DDB1- and CUL4-associated factor ...1112.2     33.5     31     42
926Q9W7F2    607   WDR1A_XENLA WD repeat-containing protein 1-A ...1162.3     33.5     26     41GO:0005884; C:actin filament; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; IDA:UniProtKB.
927Q5BIM8    397   ERCC8_BOVIN DNA excision repair protein ERCC-...1212.3     33.5     26     45GO:0005625; C:soluble fraction; ISS:UniProtKB.
GO:0032403; F:protein complex binding; ISS:UniProtKB.
GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; ISS:UniProtKB.
928B0C1R1    855   SYL_ACAM1 Leucine--tRNA ligase OS=Acaryochlor...852.4     33.5     25     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
929Q21624    607   CORO_CAEEL Coronin-like protein cor-1 OS=Caen...1152.4     33.5     23     42GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0007126; P:meiosis; IMP:WormBase.
930Q4V837    710   DTLA_XENLA Denticleless protein homolog A OS=...1182.4     33.5     23     37GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
931Q1JP79    370   ARC1A_BOVIN Actin-related protein 2/3 complex...832.5     33.1     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0030833; P:regulation of actin filament polymerization; IEA:InterPro.
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