Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR208W
Length:
297
Number of sequences:
5887
Description:
YLR208W SEC13 SGDID:S000004198, Chr XII from 559551-560444, Genome Release 64-1-1, Verified ORF, "Component of the Nup84 nuclear pore sub-complex, the Sec13p-Sec31p complex of the COPII vesicle coat, and the SEA (Seh1-associated) complex; required for vesicle formation in ER to Golgi transport and nuclear pore complex organization; the Nup84 subcomplex has a role in transcription elongation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781A8Q2R5    660   WDR48_BRUMA WD repeat-containing protein 48 h...1280.27     36.6     23     45
782O14301    595   YE85_SCHPO Uncharacterized WD repeat-containi...809.1     31.6     21     46GO:0030479; C:actin cortical patch; ISS:PomBase.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0030042; P:actin filament depolymerization; ISS:PomBase.
783P58404    760   STRN4_MOUSE Striatin-4 OS=Mus musculus (Mouse...1400.27     36.6     32     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
784Q9SJT9    1218   COPA2_ARATH Coatomer subunit alpha-2 OS=Arabi...2670.69     35.4     24     39GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
785Q29HG9    315   LST8_DROPS Protein LST8 homolog OS=Drosophila...2720.27     36.2     24     35GO:0005737; C:cytoplasm; ISS:UniProtKB.
786Q8CBE3    496   WDR37_MOUSE WD repeat-containing protein 37 O...1961.4     34.3     25     41
787P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...680.28     36.6     32     51GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
788Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...620.28     36.2     39     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
789Q96S15    920   WDR24_HUMAN WD repeat-containing protein 24 O...620.29     36.6     37     50
790Q8BUB4    400   WDFY2_MOUSE WD repeat and FYVE domain-contain...1251.9     33.5     20     40
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
791Q6PH57    340   GBB1_DANRE Guanine nucleotide-binding protein...2250.3     36.2     23     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
792A1CTE6    573   CREC_ASPCL Probable catabolite repression pro...1580.3     36.2     25     41
GO:0045013; P:carbon catabolite repression of transcription; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
793Q38960    346   LWD2_ARATH WD repeat-containing protein LWD2 ...1090.31     36.2     27     49
GO:0043153; P:entrainment of circadian clock by photoperiod; IEP:TAIR.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
794Q9W5Z5    427   WSB1_TAKRU WD repeat and SOCS box-containing ...873.8     32.7     24     47
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
795F4I1S7    838   ELP2_ARATH Elongator complex protein 2 OS=Ara...1590.47     35.8     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033588; C:Elongator holoenzyme complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016746; F:transferase activity, transferring acyl groups; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0031538; P:negative regulation of anthocyanin metabolic process; IMP:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0031349; P:positive regulation of defense response; IMP:UniProtKB.::GO:2000024; P:regulation of leaf development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006979; P:response to oxidative stress; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
796P78972    488   SLP1_SCHPO WD repeat-containing protein slp1 ...2075.7     32.3     28     40GO:0032153; C:cell division site; IDA:PomBase.::GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IGI:PomBase.
797Q9P4R5    592   CREC_EMENI Catabolite repression protein creC...1580.34     36.2     23     39GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0045013; P:carbon catabolite repression of transcription; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
798Q55E54    962   COROB_DICDI Coronin-B OS=Dictyostelium discoi...1402.1     33.9     25     44GO:0031252; C:cell leading edge; IDA:dictyBase.::GO:0042995; C:cell projection; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IDA:dictyBase.::GO:0005829; C:cytosol; IDA:dictyBase.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IBA:RefGenome.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0001667; P:ameboidal cell migration; IMP:dictyBase.::GO:0031589; P:cell-substrate adhesion; IMP:dictyBase.::GO:0030866; P:cortical actin cytoskeleton organization; IMP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IDA:dictyBase.::GO:0031276; P:negative regulation of lateral pseudopodium assembly; IMP:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0009617; P:response to bacterium; IMP:dictyBase.
799Q54DS4    1823   Y2056_DICDI WD repeat-containing protein DDB_...2270.34     36.2     20     39
800Q3UMY5    988   EMAL4_MOUSE Echinoderm microtubule-associated...1920.34     36.2     20     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
801Q9UT85    507   YIPC_SCHPO Uncharacterized WD repeat-containi...890.35     36.2     34     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0034657; C:GID complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0045721; P:negative regulation of gluconeogenesis; ISS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:PomBase.
802Q9T014    1036   SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidop...1680.35     36.2     27     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:TAIR.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
803Q75BY3    425   PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS...620.36     35.8     35     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
804P52287    340   GBB3_RAT Guanine nucleotide-binding protein G...2660.38     35.8     21     37
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
805Q5RKI0    606   WDR1_RAT WD repeat-containing protein 1 OS=Ra...890.38     36.2     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
806O13923    601   CORO_SCHPO Coronin-like protein crn1 OS=Schiz...1180.39     35.8     31     47GO:0030479; C:actin cortical patch; IDA:PomBase.::GO:0005826; C:actomyosin contractile ring; IDA:PomBase.::GO:0005885; C:Arp2/3 protein complex; ISS:RefGenome.::GO:0051286; C:cell tip; IDA:PomBase.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0051666; P:actin cortical patch localization; ISS:RefGenome.::GO:0051017; P:actin filament bundle assembly; TAS:PomBase.::GO:0030041; P:actin filament polymerization; NAS:PomBase.::GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; ISS:RefGenome.
807Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...2291.1     34.7     23     40GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
808E9Q349    535   WDR25_MOUSE WD repeat-containing protein 25 O...1960.41     35.8     25     41
809Q5ZLL7    751   WDR91_CHICK WD repeat-containing protein 91 O...660.43     35.8     35     47
810O93277    609   WDR1_CHICK WD repeat-containing protein 1 OS=...890.43     35.8     25     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
811Q9USR0    404   CKN1_SCHPO DNA excision repair protein ckn1 O...900.44     35.8     30     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0070912; C:Ddb1-Ckn1 complex; IDA:PomBase.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
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