Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR208W
Length:
297
Number of sequences:
5887
Description:
YLR208W SEC13 SGDID:S000004198, Chr XII from 559551-560444, Genome Release 64-1-1, Verified ORF, "Component of the Nup84 nuclear pore sub-complex, the Sec13p-Sec31p complex of the COPII vesicle coat, and the SEA (Seh1-associated) complex; required for vesicle formation in ER to Golgi transport and nuclear pore complex organization; the Nup84 subcomplex has a role in transcription elongation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721B4HND9    680   WDR48_DROSE WD repeat-containing protein 48 h...1130.13     37.4     25     46
722Q6FWT9    467   LIS1_CANGA Nuclear distribution protein PAC1 ...2580.11     37.7     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
723O75529    589   TAF5L_HUMAN TAF5-like RNA polymerase II p300/...1160.11     37.7     28     52GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
724Q7T2F6    423   WSB1_DANRE WD repeat and SOCS box-containing ...1110.11     37.7     28     43
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
725O54927    421   WSB1_MOUSE WD repeat and SOCS box-containing ...870.19     37     26     46
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
726Q11176    611   WDR1_CAEEL Actin-interacting protein 1 OS=Cae...1180.11     37.7     25     44GO:0042643; C:actomyosin, actin part; IDA:WormBase.::GO:0030016; C:myofibril; IDA:WormBase.::GO:0016528; C:sarcoplasm; IDA:WormBase.
GO:0051015; F:actin filament binding; IDA:WormBase.
GO:0051016; P:barbed-end actin filament capping; ISS:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0030836; P:positive regulation of actin filament depolymerization; IDA:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.
727Q55DM1    3619   LVSA_DICDI BEACH domain-containing protein lv...690.12     37.7     33     55GO:0031164; C:contractile vacuolar membrane; IDA:dictyBase.::GO:0005624; C:membrane fraction; IDA:dictyBase.::GO:0005625; C:soluble fraction; IDA:dictyBase.
GO:0005543; F:phospholipid binding; IDA:dictyBase.
GO:0007155; P:cell adhesion; IMP:dictyBase.::GO:0006874; P:cellular calcium ion homeostasis; IMP:dictyBase.::GO:0033298; P:contractile vacuole organization; IMP:dictyBase.::GO:0000915; P:cytokinesis, actomyosin contractile ring assembly; IMP:dictyBase.::GO:0007032; P:endosome organization; IMP:dictyBase.::GO:0007041; P:lysosomal transport; ISS:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.
728Q19124    578   A16L1_CAEEL Autophagic-related protein 16.1 O...10410     31.6     30     43
729P90917    412   RBA1_CAEEL Probable histone-binding protein r...1691.6     33.9     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:WormBase.
GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
730Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...2300.12     37.4     24     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
731Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...670.54     35.8     33     52GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
732P93340    326   GBLP_NICPL Guanine nucleotide-binding protein...1264.3     32.3     23     40
733Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...1000.16     37.4     28     52GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
734Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...2670.15     37.4     24     40GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
735Q9AUR8    1218   COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza...2670.23     37     25     40GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
736Q12834    499   CDC20_HUMAN Cell division cycle protein 20 ho...1520.14     37.4     26     39GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.
GO:0051488; P:activation of anaphase-promoting complex activity; IDA:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
737Q9H7D7    661   WDR26_HUMAN WD repeat-containing protein 26 O...1210.14     37.4     26     43GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:HPA.
738Q4IBR4    1046   HIR1_GIBZE Protein HIR1 OS=(Wheat head blight...1362.6     33.5     24     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
739P69104    318   GBLP_TRYBR Guanine nucleotide-binding protein...1860.16     37     26     41
740P69103    318   GBLP_TRYBB Guanine nucleotide-binding protein...1860.16     37     26     41
741P79147    340   GBB3_CANFA Guanine nucleotide-binding protein...2730.14     37     21     38GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
742Q59RH5    382   HAT2_CANAL Histone acetyltransferase type B s...1430.8     34.7     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
743Q5REE6    423   WDR12_PONAB Ribosome biogenesis protein WDR12...3120.14     37.4     25     39GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
744P23232    341   GBB_LOLFO Guanine nucleotide-binding protein ...2300.15     37     23     37
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
745Q94AI7    1131   TPL_ARATH Protein TOPLESS OS=Arabidopsis thal...960.15     37.4     29     45GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0042803; F:protein homodimerization activity; IPI:TAIR.
GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0010072; P:primary shoot apical meristem specification; IMP:TAIR.::GO:0009733; P:response to auxin stimulus; IPI:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010051; P:xylem and phloem pattern formation; IGI:TAIR.
746Q9R099    442   TBL2_MOUSE Transducin beta-like protein 2 OS=...2890.15     37     24     40
747Q9NQW1    1179   SC31B_HUMAN Protein transport protein Sec31B ...2010.15     37.4     21     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
748Q5RAC9    607   A16L1_PONAB Autophagy-related protein 16-1 OS...1000.9     34.7     27     51GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
749Q9LJR3    845   SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidop...1740.16     37.4     24     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
750P46800    329   GBLP_DICDI Guanine nucleotide-binding protein...1164.8     32.3     25     44GO:0005813; C:centrosome; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
751B3MET8    667   WDR48_DROAN WD repeat-containing protein 48 h...1130.45     35.8     24     46
records
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