Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR197W
Length:
504
Number of sequences:
5887
Description:
YLR197W NOP56 SGDID:S000004187, Chr XII from 546097-547611, Genome Release 64-1-1, Verified ORF, "Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that direct 2'-O-methylation of pre-rRNA during its maturation; overexpression causes spindle orientation defects"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q4R779    530   NOP58_MACFA Nucleolar protein 58 OS=Macaca fa...4712e-99     316     40     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
32A2QE38    580   NOP58_ASPNC Nucleolar protein 58 OS=Aspergill...3953e-99     317     44     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
33Q6CKR8    511   NOP58_KLULA Nucleolar protein 58 OS=1267 / NR...4143e-99     315     41     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
34Q59S06    515   NOP58_CANAL Nucleolar protein 58 OS=Candida a...4118e-98     311     44     64GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
35Q753I4    513   NOP58_ASHGO Nucleolar protein 58 OS=Y-1056) (...4158e-98     311     42     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
36A7F2R6    570   NOP58_SCLS1 Nucleolar protein 58 OS=mold) (Wh...4441e-97     313     41     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
37A5DHW0    504   NOP58_PICGU Nucleolar protein 58 OS=1539 / NB...4141e-97     310     43     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
38Q6FQ21    513   NOP58_CANGA Nucleolar protein 58 OS=NRRL Y-65...4166e-95     303     42     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
39A3LUT0    515   NOP58_PICST Nucleolar protein 58 OS=NRRL Y-11...4604e-94     302     42     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
40Q4PBF2    582   NOP58_USTMA Nucleolar protein 58 OS=Ustilago ...4222e-93     302     41     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
41P0CP26    568   NOP58_CRYNJ Nucleolar protein 58 OS=ATCC MYA-...4047e-93     300     43     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
42P0CP27    565   NOP58_CRYNB Nucleolar protein 58 OS=(Filobasi...4047e-93     300     43     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
43Q6BIX6    517   NOP58_DEBHA Nucleolar protein 58 OS=0083 / IG...4112e-91     295     43     64GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
44Q55FI4    638   NOP58_DICDI Nucleolar protein 58 OS=Dictyoste...4751e-88     291     38     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
45O04656    450   NOP5C_ARATH Putative nucleolar protein 5-3 OS...3816e-76     252     40     61GO:0016020; C:membrane; IDA:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
46Q58105    414   Y694_METJA Uncharacterized NOP5 family protei...2483e-40     155     35     58
GO:0005515; F:protein binding; IPI:IntAct.
47Q5U5C5    498   PRP31_XENLA U4/U6 small nuclear ribonucleopro...2512e-26     115     27     50GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
48Q8CCF0    499   PRP31_MOUSE U4/U6 small nuclear ribonucleopro...2511e-24     110     27     49GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
49Q6NVP6    498   PRP31_XENTR U4/U6 small nuclear ribonucleopro...2512e-24     109     26     49GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
50Q7SXM7    508   PRP31_DANRE U4/U6 small nuclear ribonucleopro...2502e-23     106     26     48GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:ZFIN.::GO:0060041; P:retina development in camera-type eye; IMP:ZFIN.
51Q8WWY3    499   PRP31_HUMAN U4/U6 small nuclear ribonucleopro...2513e-22     103     27     49GO:0015030; C:Cajal body; IDA:MGI.::GO:0071339; C:MLL1 complex; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:MGI.::GO:0005684; C:U2-type spliceosomal complex; IC:BHF-UCL.::GO:0005687; C:U4 snRNP; IDA:BHF-UCL.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:MGI.::GO:0005690; C:U4atac snRNP; TAS:BHF-UCL.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0070990; F:snRNP binding; IPI:BHF-UCL.
GO:0000244; P:assembly of spliceosomal tri-snRNP; IMP:BHF-UCL.
52O42904    518   PRP31_SCHPO Pre-mRNA-processing factor 31 OS=...2406e-22     102     28     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000244; P:assembly of spliceosomal tri-snRNP; ISS:PomBase.::GO:0007126; P:meiosis; NAS:PomBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
53P49704    494   PRP31_YEAST Pre-mRNA-processing factor 31 OS=...1990.000000001     64.3     24     46GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000387; P:spliceosomal snRNP assembly; IDA:SGD.
54Q2GZN9    1255   NST1_CHAGB Stress response protein NST1 OS=63...560.45     37     32     71GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
55Q8SX83    5560   SPEN_DROME Protein split ends OS=Drosophila m...765.3     33.5     26     55GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007411; P:axon guidance; IMP:UniProtKB.::GO:0007173; P:epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0048106; P:establishment of thoracic bristle planar orientation; IMP:FlyBase.::GO:0007403; P:glial cell fate determination; IMP:UniProtKB.::GO:0008586; P:imaginal disc-derived wing vein morphogenesis; IMP:FlyBase.::GO:0035321; P:maintenance of imaginal disc-derived wing hair orientation; IMP:FlyBase.::GO:0007400; P:neuroblast fate determination; IMP:UniProtKB.::GO:0007422; P:peripheral nervous system development; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0007379; P:segment specification; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
56Q68WL4    568   RS1_RICTY 30S ribosomal protein S1 OS=Rickett...950.67     36.2     34     46GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
57Q9ZD28    568   RS1_RICPR 30S ribosomal protein S1 OS=Rickett...950.77     36.2     34     46GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
58P42269    468   HPCC_ECOLX 5-carboxymethyl-2-hydroxymuconate ...503.9     33.9     42     56
GO:0016620; F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; IEA:InterPro.
GO:0019439; P:aromatic compound catabolic process; IEA:UniProtKB-KW.
59Q54QC0    2381   MYBU_DICDI Myb-like protein U OS=Dictyosteliu...564.2     33.9     36     46
GO:0003677; F:DNA binding; IEA:InterPro.
60Q55DM1    3619   LVSA_DICDI BEACH domain-containing protein lv...546     33.5     31     59GO:0031164; C:contractile vacuolar membrane; IDA:dictyBase.::GO:0005624; C:membrane fraction; IDA:dictyBase.::GO:0005625; C:soluble fraction; IDA:dictyBase.
GO:0005543; F:phospholipid binding; IDA:dictyBase.
GO:0007155; P:cell adhesion; IMP:dictyBase.::GO:0006874; P:cellular calcium ion homeostasis; IMP:dictyBase.::GO:0033298; P:contractile vacuole organization; IMP:dictyBase.::GO:0000915; P:cytokinesis, actomyosin contractile ring assembly; IMP:dictyBase.::GO:0007032; P:endosome organization; IMP:dictyBase.::GO:0007041; P:lysosomal transport; ISS:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.
61Q6CEV2    2183   SEC16_YARLI COPII coat assembly protein SEC16...1026.4     33.5     27     50GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0048208; P:COPII vesicle coating; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
records
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