Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR196W
Length:
576
Number of sequences:
5887
Description:
YLR196W PWP1 SGDID:S000004186, Chr XII from 543968-545698, Genome Release 64-1-1, Verified ORF, "Protein with WD-40 repeats involved in rRNA processing; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541D3TLL6    411   LIS1_GLOMM Lissencephaly-1 homolog OS=Glossin...1727.9     33.1     22     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
542P93471    672   COP1_PEA E3 ubiquitin-protein ligase COP1 OS=...1647.9     33.1     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
543B0XAF3    338   CIAO1_CULQU Probable cytosolic iron-sulfur pr...918     32.7     33     48
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
544Q9VKQ3    420   WDR12_DROME Ribosome biogenesis protein WDR12...1718     33.1     23     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
545B8P4B0    438   LIS11_POSPM Nuclear distribution protein PAC1...438.1     33.1     42     60GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
546B4GT01    419   WDR12_DROPE Ribosome biogenesis protein WDR12...1388.1     32.7     26     46GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
547Q58D00    454   FBXW2_BOVIN F-box/WD repeat-containing protei...418.1     33.1     44     61
548Q29KQ0    419   WDR12_DROPS Ribosome biogenesis protein WDR12...1388.2     32.7     26     46GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
549A1DHW6    689   SCONB_NEOFI Probable E3 ubiquitin ligase comp...1038.3     33.1     27     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
550Q86A97    400   TSSC1_DICDI Protein tssc1 homolog OS=Dictyost...428.3     32.7     36     64GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
551Q05B17    678   WDR48_XENTR WD repeat-containing protein 48 O...1788.3     33.1     21     43GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
552Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1038.5     33.1     27     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
553B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...1038.5     33.1     27     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
554Q9USR0    404   CKN1_SCHPO DNA excision repair protein ckn1 O...1208.6     32.7     26     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0070912; C:Ddb1-Ckn1 complex; IDA:PomBase.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
555P36130    643   CAF4_YEAST CCR4-associated factor 4 OS=Saccha...2338.7     33.1     21     40GO:0030014; C:CCR4-NOT complex; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
556Q6PFM9    677   WDR48_DANRE WD repeat-containing protein 48 O...1788.7     33.1     21     44GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
557A5DST9    491   YTM1_LODEL Ribosome biogenesis protein YTM1 O...799     32.7     32     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
558Q9W5Z5    427   WSB1_TAKRU WD repeat and SOCS box-containing ...619.2     32.7     36     54
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
559Q9BQ67    446   GRWD1_HUMAN Glutamate-rich WD repeat-containi...829.4     32.7     28     52GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
560B6GZA1    673   SCONB_PENCW Probable E3 ubiquitin ligase comp...1129.6     32.7     25     48
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
561Q17BB0    427   WDR12_AEDAE Ribosome biogenesis protein WDR12...2029.7     32.7     23     44GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
562Q5RAW8    677   WDR48_PONAB WD repeat-containing protein 48 O...1789.9     32.7     22     43GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
563Q8TAF3    677   WDR48_HUMAN WD repeat-containing protein 48 O...1789.9     32.7     22     43GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:UniProtKB.
records
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